Pseudomonas vanderleydeniana: HU752_028105
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Entry
HU752_028105 CDS
T07587
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pvw
Pseudomonas vanderleydeniana
Brite
KEGG Orthology (KO) [BR:
pvw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvw03400
]
HU752_028105 (phrB)
Enzymes [BR:
pvw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HU752_028105 (phrB)
DNA repair and recombination proteins [BR:
pvw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HU752_028105 (phrB)
Prokaryotic type
HU752_028105 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QXI27720
UniProt:
A0A9E6TS07
LinkDB
All DBs
Position
6242884..6244329
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AA seq
481 aa
AA seq
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MQLFWLRTDLRLHDNTALSAAARSGPTVAVFLLSPGQWLAHDDAPCKVDFWLRNLRELGQ
ALATLNIPLLIRQADTWDQAPTVLLELCQSLGVDAVHVNEEYGVHETRRDRAVAKAVEAR
DIDFHSHLDQLFFRPGSVLTRTGGYFQVFSQFRKVCYSRLHGALPALVTPPAPQAPLPVK
SDPVPDTLDGFAPAPQALSNLWPAGENEARRRLESFADQQIDYYQSERDFPAKPGTSQLS
PYLAAGVVSPRQCLHAALQSNLGEFDSGNVGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRHAPRDLEAWQQGRTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPISQSQKFDSEGLFIK
HWLPELAGLNKKDVHNPAALGGLFGVAGYPQPIVDLASSRERALAAFKSLPSRPESGGAH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgttctggttgcgcaccgacctgcgcctgcacgacaacaccgccctcagcgcc
gccgcgcgcagcgggccgacggtggcggtgttcctgctcagccccggacaatggctggcc
catgacgacgcgccgtgcaaggtcgacttctggctgcgcaacctgcgggagcttggccag
gcgctggccacgctgaacatcccgttgctgattcgccaggcggatacctgggaccaggcc
cccaccgtgctgctcgaactgtgccagtcgctgggcgtcgacgccgtgcatgtcaacgaa
gagtacggtgtccacgaaacccgtcgggaccgggccgtggccaaggccgtcgaggcccgg
gacatcgacttccacagccacctcgaccagttgttcttccgtccgggcagtgtgctgacc
cgcaccggtggctatttccaggtcttcagccagtttcgcaaggtctgctacagccgcctg
cacggtgcgctgccagcgctggtcacgccaccggcgccccaggcaccgttgccggtgaag
agcgacccggttcccgacaccctcgacgggttcgcccctgcaccccaggccctgagcaac
ctctggcccgccggtgaaaacgaagcccggcggcgcctggaaagcttcgccgaccaacag
atcgactactaccagagcgaacgcgacttcccggccaagcccggcaccagccagctttct
ccctatctcgcagccggcgtggtgtccccgcgccaatgcctgcacgccgccctgcaaagc
aacctgggtgaattcgacagcggcaatgtcggcgccgtcacctggatcaacgagctgctc
tggcgcgagttctacaagcacatcctggtcggctatccacgggtctcgcgccatcgcgca
ttccgtccggagaccgaggccgtggcctggcgccatgcaccgcgcgacctggaagcctgg
cagcaaggccgtaccggcctgccgatcatcgacgcggccatgcgccaattgcttgaaacc
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgaccaagaacctgctg
atcgactggcgcgaaggcgagcgcttcttcatgcgccacctgatcgacggcgacctggcg
gccaacaacggcggctggcagtggagttcctccaccggtaccgactcggccccctacttc
cgcatcttcaacccgatcagccagtcgcagaaattcgacagcgaaggcctgttcatcaag
cactggttgccggaactggccggcctgaacaaaaaggatgtgcacaacccggccgccctc
ggcggcctgttcggcgtcgccggttatccacagccgatcgtcgacctggcgagcagccgc
gaacgggccctcgccgcgttcaagagcctgccgtcgcgcccggaatccgggggcgcgcat
gagtga
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integrated database retrieval system
