Plasmodium vivax: PVX_002575
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Entry
PVX_002575 CDS
T01073
Name
(RefSeq) replication factor C subunit 1, putative
KO
K10754
replication factor C subunit 1
Organism
pvx
Plasmodium vivax
Pathway
pvx03030
DNA replication
pvx03410
Base excision repair
pvx03420
Nucleotide excision repair
pvx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVX_002575
03410 Base excision repair
PVX_002575
03420 Nucleotide excision repair
PVX_002575
03430 Mismatch repair
PVX_002575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvx03032
]
PVX_002575
03400 DNA repair and recombination proteins [BR:
pvx03400
]
PVX_002575
DNA replication proteins [BR:
pvx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PVX_002575
DNA repair and recombination proteins [BR:
pvx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PVX_002575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_assoc_2
AAA_30
BRCT_2
DNAX_ATPase_lid
AAA_14
AAA_22
PTCB-BRCT
nSTAND3
AAA_19
AAA_16
RuvB_N
SRP54
AAA_18
Motif
Other DBs
NCBI-GeneID:
5472106
NCBI-ProteinID:
XP_001612854
UniProt:
A0A1G4H7Z0
A5KBT1
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All DBs
Position
4:113102..116363
Genome browser
AA seq
945 aa
AA seq
DB search
MSFKGKKLFDDDSSDGGRKRKRLKKVSSSLFDDDDNDHNNSNTYGKDLFNRGGDSHASES
KSVVEIKDDEDAEQQDAYHTTGSTSNRSLPKKSASKPMYQDITSYFKSSSKKTEDQAEED
AEADQIGGGHQGKGPARGNTSLFDVESKKFKKEAPHTGTGLKREREDDLTIMLDEHKYKK
KNTSPGKGKTKEEPDYINSGGSTTKKKNLSSLATPGGSNNREDAANKFDYLPFHNLKFVL
TGVFKNFSRDELQSKIKEHGGSVMSAVSSKTHYLIHGEYLEDGRMYNEGKKYQKAFELQK
MSKSIIKILNEEQLLQMMPQEKDQTPKGGDAGDGEDDPDGFEKRQQSDSTKIRSESGNSG
GMSGGNSYNRAVHSEQKNPPSGGAPTEQREVLNQLWVEKYRPKNLNELVGNNQNVLKLKN
WLASWDDVCIKGLKKQVTKTFRGVYENVNARCALLSGSAGIGKTTTAKIVAESSGYSVIE
FNASDERNKAAVEKISEMATGGYSIASIKSRKLTKTCIIMDEVDGMSSGDKGGSAAILKL
IEKTKCPIICICNDRQNAKMRTLANKCYDLKFTTPNKNSVVKRLLEICKQEDIMMEPNAL
ELLWESTNGDLRQMLNALQLLSKTYKRIQFLDLKKELNNSNKNIQSLANPFEITLKLLNF
HESSKLKVREIMDLFFVDYELIPFFISENYTNVFNDNDKSASSINKWNAYSQISYDLALA
ERIKYNMKTTMDFSLLPHFSILSCVCPVMRIKMLKSFMSGRINFPSAFGKISTFNKNKRL
LNEVCFNMSYKLNVCPKHMVTSGFLNYIYAQIISPLLSNNIPKAIQLMEEYNVTKEMITE
NIPCLRLPTQENLYDKLDSKIKASFTRLYNASHVIKNDPNMMRKGLKSTEKKSSFKLNEY
ESDEDMDELSESKEEKDDDVLVKTKVDKKPAAKGKATPRSKAKKR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcaaaggaaagaaacttttcgatgacgacagcagcgacggggggaggaaacga
aagcgactgaagaaggtgtccagcagcttgttcgacgacgacgataatgatcacaataac
agcaacacttacgggaaggatttgtttaaccgagggggagactcccacgcatctgaatcc
aaaagcgtggtcgaaattaaggacgacgaggatgccgagcagcaggatgcctaccacacc
acgggaagcacgtccaacaggtcgctgcccaaaaagtcggcaagcaaacccatgtaccaa
gacataacgtcctacttcaaatcgagttccaagaaaacggaggaccaggcagaggaagat
gcggaggcagaccaaattggaggcggccaccaggggaagggccccgcacgaggaaacaca
agtctcttcgatgtggaaagcaaaaagtttaaaaaggaagccccccatacgggcaccggg
ctgaagagggagagggaagatgacctgaccatcatgctagacgaacacaagtataaaaaa
aaaaacacctctccagggaaaggcaaaaccaaagaagaaccagactatatcaatagcggc
gggagcaccacaaaaaaaaaaaacctctcctccttggccacccccggtggaagtaacaac
agggaagatgcagccaacaaattcgattacctcccctttcataacctcaaatttgtgctt
actggggtgtttaagaatttctctcgagacgagttacaatcaaaaattaaagaacatggg
ggaagcgttatgtccgctgtgtcgtccaaaacgcattatctcattcatggcgagtacctg
gaagacggccggatgtacaacgaggggaagaagtaccagaaggccttcgagctccagaag
atgagcaaatccattattaaaattctgaatgaggagcagctgctgcagatgatgccgcag
gagaaggaccaaacgcccaaggggggggacgcgggcgacggggaggacgacccggacggc
ttcgaaaagaggcagcagagcgactccacgaagattagaagcgagagtggaaacagtggt
ggcatgagcggtggaaacagctacaaccgcgctgtgcacagcgagcagaagaacccaccc
agcggcggcgcacctacggagcaacgcgaagtcctcaaccaactgtgggtggagaagtac
agacccaaaaacctaaacgaactggtggggaacaaccaaaatgtgctcaagctaaaaaat
tggctagccagctgggacgatgtctgcataaaggggctcaaaaaacaagtgaccaaaacg
ttcagaggggtgtacgaaaatgtgaatgccaggtgtgcccttttgagtggctccgcagga
attgggaaaacgacgactgcaaaaattgtggcggagagctccggatatagcgttatcgaa
tttaatgcgtccgatgagaggaacaaagcggcggtggaaaaaatcagcgaaatggccacc
ggggggtactccattgcttccattaaaagccgcaaattaaccaaaacgtgtataatcatg
gacgaagtggatggcatgtccagcggagacaaaggaggtagcgcagccatccttaagttg
atcgaaaaaacaaagtgcccaattatctgcatatgcaatgataggcaaaatgcaaaaatg
agaacattagccaacaaatgctacgatttaaaatttaccactccaaacaaaaatagcgtc
gtgaaaaggctcctcgaaatatgcaagcaggaggacatcatgatggagccaaacgcattg
gaacttctatgggaaagcaccaatggagatttgagacaaatgctaaacgcactgcagtta
ctctccaagacgtataaacgaatccaattcttggacctaaaaaaggagctaaacaattct
aataaaaacatacagtcgctagccaacccatttgaaataacactcaaacttttaaatttc
catgaatcatcaaaattaaaggtacgggaaattatggacctcttctttgtagactacgaa
ttgattcccttttttataagcgaaaattataccaacgtatttaatgataatgataaatcg
gctagctctataaataaatggaatgcctactctcaaatatcatacgatttggctttagct
gaaaggattaaatataatatgaagacgaccatggatttctctctccttccccacttctct
atcctgtcctgtgtatgccccgtcatgcgaattaaaatgttaaaatcgtttatgtctggc
cgaattaacttcccttctgcctttggaaagatctccacttttaataaaaataaaaggcta
ctgaacgaggtctgctttaacatgtcctataagctgaacgtctgcccaaagcacatggtg
acctccggcttcttaaattatatttacgcacaaatcatttctcccctcctgagtaataac
atccccaaggccattcaactaatggaagaatataacgtcaccaaagaaatgatcaccgaa
aatatcccctgcttgagattacccactcaggaaaacctgtatgataaattggactctaaa
attaaggcctccttcactaggctctacaacgcttcccacgttattaagaatgaccccaac
atgatgcgcaagggactcaagtccactgaaaagaagagctccttcaaactgaatgagtac
gaatctgatgaggatatggatgagctcagcgaatcgaaggaggagaaggacgacgacgtg
ctcgttaagactaaagtggataagaagccggccgccaagggcaaggccacccctcgctcc
aaggccaagaagcgttga
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