Plasmodium vivax: PVX_081325
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Entry
PVX_081325 CDS
T01073
Name
(RefSeq) mRNA cleavage factor-like protein, putative
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pvx
Plasmodium vivax
Pathway
pvx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PVX_081325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_081325
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
PVX_081325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
VMAP-M14
T2SSL
Motif
Other DBs
NCBI-GeneID:
5472810
NCBI-ProteinID:
XP_001613540
UniProt:
A5K9S5
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All DBs
Position
2:<250088..>250891
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AA seq
267 aa
AA seq
DB search
MLTSSGASSGGHAGQASPANAATPGSAANPANAATPGSAATPANAATLASREAKAEWLVY
PQANYEFNIDEKLKSKFVMDADKCKKRINTYNQNGIRSSALAIILCHRYEYPHLLLLQNV
ESQTYYLLSGKYRSWEKPRDVLKKKLQKYVNQIRDMHFATSHFNAEQKESEDPIEIGEFL
GEWWKTQFNSVYLPYLPAHITRPKEYIRLYQVTLTSRCIFHLPPGFTLKALPLFDLGSCG
VAIGGLTSVLSRFKLHCMVPLEEGQEG
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgtcgagcggcgcgtccagcggcggccacgcggggcaggcgagccccgctaac
gcggcaacccctgggagcgccgccaaccccgccaacgcagcaacccctgggagcgccgct
acccccgctaacgccgctaccctggcgagccgggaggccaaggccgagtggctggtgtac
ccccaggcgaactacgaattcaacatcgatgagaaactgaagagcaaatttgtaatggac
gcggacaagtgcaagaaaaggatcaacacgtataaccaaaatgggatccgaagttcagct
ctggccatcatcctgtgccaccgatatgagtaccctcacctgttgctcctgcagaatgtg
gagagtcagacgtactaccttctaagtgggaagtaccgatcgtgggaaaagccgagggat
gttttgaaaaagaaactacagaaatatgttaaccaaattagggacatgcatttcgcgact
agccatttcaacgccgaacagaaagaatctgaagatcccatcgaaattggagagttcctt
ggtgagtggtggaaaacgcaattcaattccgtgtaccttccctatttacctgctcatata
accaggccgaaggagtacatacggttataccaagtgacgctaacttctaggtgcattttt
catttgccccccgggttcactctcaaggcgctgcccctcttcgacctgggcagctgcgga
gtggccatcggcgggctcaccagcgtcctctcccgctttaagctccactgcatggtgccg
ctggaggagggccaggaggggtaa
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