Plasmodium vivax: PVX_082410
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Entry
PVX_082410 CDS
T01073
Name
(RefSeq) chromatin assembly factor 1 P55 subunit, putative
KO
K10752
histone-binding protein RBBP4
Organism
pvx
Plasmodium vivax
Pathway
pvx03082
ATP-dependent chromatin remodeling
pvx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PVX_082410
03083 Polycomb repressive complex
PVX_082410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvx03036
]
PVX_082410
Chromosome and associated proteins [BR:
pvx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PVX_082410
Histone modification proteins
HAT complexes
HATB complex
PVX_082410
HDAC complexes
Sin3A-HDAC complex
PVX_082410
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PVX_082410
PRC2.2
PVX_082410
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PVX_082410
Heterochromatin formation proteins
Other heterochromatin formation proteins
PVX_082410
Chromatin remodeling factors
NuRD complex
PVX_082410
NuRF complex
PVX_082410
NuRF complex (fruit fly)
PVX_082410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SCAP
NBCH_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
5473368
NCBI-ProteinID:
XP_001614083
UniProt:
A0A1G4HGP6
A5K7U2
LinkDB
All DBs
Position
12:943725..945326
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AA seq
533 aa
AA seq
DB search
MMDVMRERNRNLDLSDSYEGRSPAVSGNTAVSGNNVCIGNAANSGNTASSGHAANEASVD
ISGERYIIWRRNTPFLYNALLRNKLEWPSLTVEFIGSDNSFKAKTNYFTNKILLGTHTSN
QDSEYVYIGEVKAPLYSTKEDVLQYENYTGFINNKKKKKGHPLPSFEIKAKLLHPGEVIR
ATHLPSNSFFIVTQTCNGSILLFDYTKHPSFPSDTSTCYPQMILKGHSSEGSGLCWNINR
VYDSCAKQGTAFKARGEADDEPLGDESLGGVNTSNLLLASCASDGSICLWDINKGTKSNE
VPRTYGINKTGKSADYNLKIYEHTPTLSPLCTWKNKNEETSLNDIFFHPKFKNVLGVCDD
NGFMSLYDVRVKNFFSKAELSFKDHNAAMNAFSFDTFSEYAFCCGYADGLVSIWDLRHEK
GSLLQLDYHTQSINRIKFCLMQSGIFGSCSDDGTACIWDISRNSSTYGQVRKMEDDIYNN
AKRIPKQLLFVHGGHVGSVYDLSWANSNTMLVATVGVDNSLQVWHMNEQFLFQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgtcatgcgagagagaaacaggaatttggacctgagcgattcgtatgagggg
cgcagtcctgcggttagcggcaataccgcggttagcggcaacaatgtgtgcatcggcaac
gctgccaatagcggcaataccgccagcagcggccacgcggccaacgaggcgagcgtggac
atcagcggcgagcggtacatcatctggaggaggaacacgccattcctgtacaacgcgctg
ctgaggaacaagctggagtggccctccctgacggtcgaatttataggcagcgataattcg
ttcaaagccaagacgaactatttcacaaataaaatcctcctcggcacacacacgtccaac
caagattctgagtacgtgtacattggggaggtgaaggccccactgtactcaacaaaggag
gacgtcttgcaatatgaaaactacacggggtttattaacaacaagaagaagaaaaagggc
cacccactcccttcctttgaaataaaggccaagttgctacacccaggggaagtcataaga
gctactcacctacctagcaactcctttttcatcgttacgcagacgtgcaatggaagcatc
ttgctgtttgactatacaaagcatccctcgttcccctcagacacgtccacttgctacccc
cagatgatcctcaaggggcacagcagtgaggggagtggcttatgttggaacatcaaccgg
gtgtacgacagctgcgccaagcaaggcaccgcgtttaaggcgaggggggaagcagacgat
gaaccccttggggatgaatcccttggaggtgtaaacaccagcaacttgctcctcgcctcg
tgcgcatccgatggaagcatctgcctctgggatataaacaaagggacgaagagcaacgaa
gtgccgcgaacgtacggcataaacaaaacggggaagagcgccgactacaatttgaagatt
tacgaacacacacccaccttgagtcctctctgcacgtggaaaaataaaaatgaagagaca
tcgctgaatgacattttctttcatcccaaatttaaaaacgtcttgggggtttgcgacgac
aatggttttatgagtctctacgatgtgagggttaaaaactttttttccaaagcggagctc
agttttaaagatcacaacgcagctatgaatgccttttcttttgataccttttccgaatat
gctttttgctgtgggtatgccgatgggttagtttccatttgggatttgagacacgaaaag
gggtctctcctgcagctagactaccacacacagagtattaacaggattaaattttgcctg
atgcagtcaggcatttttggttcctgttcagatgatgggactgcatgcatttgggacatt
tctaggaattcctcaacttatgggcaggtgcgaaaaatggaggatgacatttataataat
gccaagaggatccctaagcagctgctcttcgtgcatggggggcacgtcgggagcgtctat
gacctttcctgggccaacagcaacaccatgctggtggccaccgtgggcgtcgacaactcc
ctccaggtgtggcacatgaacgagcagttcttgttccagtga
DBGET
integrated database retrieval system
