Plasmodium vivax: PVX_087875
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Entry
PVX_087875 CDS
T01073
Name
(RefSeq) DNA mismatch repair enzyme, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
pvx
Plasmodium vivax
Pathway
pvx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PVX_087875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvx03400
]
PVX_087875
DNA repair and recombination proteins [BR:
pvx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PVX_087875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
RapZ-like_N
AAA_23
Motif
Other DBs
NCBI-GeneID:
5472700
NCBI-ProteinID:
XP_001613436
UniProt:
A5KA73
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All DBs
Position
1:247295..250012
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AA seq
905 aa
AA seq
DB search
MSEDIFPILGEPQSGSPAVGTAGADSPAMDADSVVSPTVMSFNMETKNNIKYSGICIYNM
NTNEFSLCEYIENEHFTILESLLIQCRPTCFLYLSSNDKLDDKRVKLILSLCEIKHRELG
KSDFYNSCSMENDLNKLLKPTEDVKNCISFFKMQLACRSFTSIVKHLNLLNDYSATNKCL
LTNYNINRYLKLDMAATIALNVHAEHMLVEKKASGSRGGNLTLFTFLNKCKTKIGERKLL
QWVMHPIRDEAKINERLDMVSILKEDGVMRSMIQSDYLRKVSDLDVIIKKLKIVNSAMGE
LEGEGAARRMEGGKMEGGKMEGGKMEGGKMEGGKMEGGKMEGGKIEGGKTGAKKAGGGKN
TCSIEDLVKMYDTVVVSKRIYYCLNDYEGKHRNTLERNFLTPLKEVLICLDSFVKLIELT
VDFDELCNNNFLISRKFDEQLEKLASEKDETLGMIKEHRQEVEDDINHLKGVSKKNNAKE
DIKLVDCNVNTFLFRAVKKDMSSIQQRKKTYFQVRMNKSEILFTTNKLKELCKRYEYILQ
DYNLSQEQLANKAIQVASSYWEPTTKLAKLIAQIDVLCAFAFVSASSLSVYVRPIVETNG
QVLHLIESRHPLVESNFLLMNNFIPNDVHMNKTDKRLNIITGPNMGGKSTYIRQIALICL
MAQIGCFVPCTYAKMPIFSQIMCRVGSSDIQLKGISTFFSEMIEISAIIKNADDNTLVII
DELGRGTSTYEGFGISWAVAQYILNKIKCFCLFATHFHEMSNLEDEYQGATNNHVGAKID
PEKKKISFLYEIKKGYADKSYGVHVAQIAKLPQKVIDKAFEKSKELESVENRHYFRTKLA
GGKLHGEELPGATLPGTNPDDVHKTDVQSKTHDLLRGIFSATDEESFISHVGQNTEALRE
ALREM
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatattttccccattctgggggagccccagagtgggagccccgcggtgggg
acggccggcgcggactcccccgcgatggacgccgacagcgtggtctcccccacagtgatg
agcttcaacatggaaaccaagaacaacatcaagtactccgggatctgcatctacaacatg
aatacgaacgagttctccctatgtgaatacatcgaaaatgagcacttcaccattttggag
tctttgctaatacagtgcaggccgacgtgcttcctatatctttctagcaacgacaagctg
gacgacaaaagggtaaagttaattctaagtctgtgcgaaattaaacatcgcgagttagga
aaaagcgatttttacaactcctgctcgatggaaaatgacttgaataagcttctaaaacca
acggaggacgtgaagaactgcatctccttcttcaagatgcagttggcttgtcgctccttc
accagcatcgtcaaacatttgaacctgctgaacgattacagtgccacgaataagtgtctg
ctcaccaactataacattaatcggtacctgaagctagacatggcggccaccatcgcgctg
aacgttcacgcagagcacatgttggtagagaagaaggcaagcggcagcagggggggcaac
ttgaccctcttcaccttcttaaacaagtgcaaaacgaagatcggggaaaggaagctcctg
cagtgggtgatgcacccgataagggacgaagccaaaattaatgaaaggctggacatggtc
agcatcttaaaggaagatggggtgatgcgatccatgattcagtcggattaccttcgaaag
gttagcgacttggatgttataattaagaagttaaaaattgttaacagtgcgatgggggag
ctggagggggaaggggccgcgcgcaggatggagggcggcaaaatggagggcggcaaaatg
gagggcggcaaaatggagggcggcaaaatggagggcggcaaaatggagggcggcaaaatg
gagggcggcaaaatagagggcggcaaaactggggctaaaaaagcaggagggggaaaaaac
acatgcagtatagaagacttggtaaagatgtacgacaccgtggtggtgtcgaagcggatc
tactactgcctgaacgactacgaagggaagcacagaaacacgctggagagaaacttcctc
acgcccctgaaggaggtgctcatctgtctggactccttcgtaaagctaatcgagctgacg
gtagactttgacgagttatgcaacaacaactttttaatatctcgtaaatttgatgagcag
ctggaaaagctagctagcgaaaaggacgaaacgttgggaatgataaaggagcaccggcaa
gaagtcgaagacgatattaaccacctcaaaggagttagcaaaaagaacaacgcaaaggag
gacatcaaactagtcgactgcaatgtgaatacgttcctctttagagccgtcaaaaaggac
atgtcctccattcagcagagaaagaaaacctacttccaagtgaggatgaataaaagtgaa
atactttttaccacaaataagctgaaggagctatgcaaaaggtatgaatatattctacag
gattataacctgtcgcaggaacagctagctaataaggccatccaggtagcctcatcctac
tgggagcctacgacaaagctggccaaactcattgcacagattgacgtcctctgcgcattc
gcctttgttagtgcgtctagcttatccgtttatgtaagacccattgtggagaccaacggg
caggtactacacctcatagagtcaaggcaccctctcgtagagtccaattttttactaatg
aataatttcatcccaaacgatgtacatatgaataagacagacaaacggttaaacattata
acggggccaaacatgggtggcaaaagtacctacataaggcaaatagctttaatatgcttg
atggcgcaaattgggtgcttcgtcccatgcacgtatgctaaaatgcctattttttcgcaa
attatgtgtcgagtgggttcttccgacattcagcttaaaggcatatctactttcttttct
gagatgatagaaatttcggccattataaaaaacgcagatgataatactctcgttataata
gacgaactggggagaggtacctccacctacgaagggtttggaatcagctgggcggtcgct
cagtacattcttaacaaaataaaatgcttctgcttgtttgccactcattttcacgaaatg
tcaaatttggaagatgagtaccagggggctactaacaaccatgtgggggccaaaattgat
cccgaaaaaaaaaaaatttctttcctctacgaaattaagaagggctatgcggataagagc
tacggggtgcatgtggctcagatagccaaactgccacaaaaggtcatcgacaaggcattt
gaaaaatccaaggagctcgagtccgttgagaataggcactactttagaaccaagctggcg
ggggggaagctgcatggggaggagttgcctggggcgactctaccggggactaacccggac
gatgtgcacaagacggacgtgcaaagcaaaacgcacgatctgttgcgcggcattttctcc
gccacagacgaggagagcttcatttcgcacgtcggccagaataccgaggcgctgagggag
gcgctccgcgagatgtag
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