Plasmodium vivax: PVX_089295
Help
Entry
PVX_089295 CDS
T01073
Name
(RefSeq) ATP-dependent RNA helicase prh1, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pvx
Plasmodium vivax
Pathway
pvx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVX_089295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_089295
03012 Translation factors [BR:
pvx03012
]
PVX_089295
Enzymes [BR:
pvx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PVX_089295
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PVX_089295
Translation factors [BR:
pvx03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PVX_089295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_11
nSTAND3
ResIII
AAA_22
AAA_14
AAA_19
Flavi_DEAD
MATalpha_HMGbox
TsaE
T2SSE
NPHP3_N
Sigma54_activat
NACHT
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5474239
NCBI-ProteinID:
XP_001614948
UniProt:
A5K5N6
LinkDB
All DBs
Position
5:442308..445059
Genome browser
AA seq
809 aa
AA seq
DB search
MDELPILKHKKEIKKCIKRNRLIIIKGETGCGKTTQVPQIINRYFFEKRGKRKRGSGDGN
DGNSAASQKKPPMRMLISLPRRVATITVAERVAKEMNRGRIGTYVGYAIRFKNVTSNETR
IKFVTDGILIREIMNDPFLKKYNFLILDEVHERSIRTDVLLGYIRVLMGKRKKLRIILMS
ATLDVDTFKNFFGDPPIICIPHKLHPVSIFYPIRPVEDYLISVVCTVLQIHFGQGEERQG
ELRGEQGQQRDDQAADQPVDPPTELPTAAPPPIGDVLVFLPGQEEIEVVNLMLREKLKII
YKGSLLRKLIEDGQGGEEEEGGKGEEGEVLDKINVALNAKNPMEDGVCFHFGHREVVPDK
IYAMKILQLYSSLPNRKQRVVFEPAPPNTRKVILSTNVAETSVTIPNIKYVVDSGRVKIK
FFDAKKGSSVLKVTQISKDAAAQRSGRAGREAPGQVYRVYSKEDYEGMNPFLIPEIFRSD
LTQIYLELKAMNVPNPLQFNFPENPKKELLLHSAKVLFRINAIDVHNNLTELGKKMCLLP
LSPIYANMMLCSVELHCMDEVATIVAFLNCESIFLNYNFYDDLKVLGEDSAGGGAANVGG
ANPDGANPDGANPDDAPPDPPLTEKNKLINVARRKLMHPDGDHLTLLHIFYLWQEEATPN
ERKYFCSLYALNNETLQQAQKIKEQILQIMISKMGISVSPKLHMHKWDQVLICLCKSCFF
NVARATSKANEFINVVTKTKLQIHPSSTLFSSHIKPSFIFYSDVVQTKRLYARTVTKVEG
DWLLKYASQNFKLAQASTGVAVEKEPPAK
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctgcccatactgaagcacaagaaggaaataaagaaatgcatcaagaggaac
aggttaataattattaagggggagaccgggtgcgggaagacaacccaggtgcctcaaata
ataaacaggtacttttttgaaaagagggggaagaggaagaggggcagtggcgatgggaat
gatggcaactccgccgcttcgcaaaagaagccccccatgcgcatgcttatctcgctgccc
aggagagtagcaaccatcacggtagcggagagagtggcgaaagaaatgaacagaggaagg
ataggaacgtacgtaggatatgccatccgatttaaaaatgtaacatcaaatgaaactaga
ataaagtttgtgacagatgggatcctcattagggaaattatgaatgacccttttttaaaa
aaatataattttttaattttggatgaagtacatgagaggtctattaggacggatgtcctg
ttgggttacattcgagtgctaatggggaagaggaagaagctgaggatcatcctcatgtct
gccactttggatgtggacacttttaaaaacttctttggcgacccgcccatcatttgcatc
ccccacaagctgcaccccgtcagcattttctaccccatccggcccgtggaggactacctc
atttcggtggtgtgcaccgtcctgcagattcatttcgggcagggggaggagcggcagggt
gagctgaggggtgagcagggtcagcagcgggatgaccaagcggcggaccaaccggtggat
cccccaacagagctccccaccgcggccccgccccccatcggagacgtgctcgtcttcctg
cccggccaggaagaaatcgaagtggtaaacctaatgctgagggaaaagctgaagatcatt
tacaagggctccctactgcgaaagctgattgaggacggtcaggggggggaggaggaagaa
ggagggaagggagaagaaggggaggtgctggacaaaattaacgtcgccctgaatgcgaag
aaccccatggaggatggcgtttgcttccacttcggccacagggaggtggtgccggacaag
atatacgccatgaagattctgcagctctactcctccctcccgaataggaagcagcgggtc
gtcttcgagcccgcgccgcccaacacgaggaaggtcatcctcagcacgaacgtcgccgag
acgtcagtgaccatcccaaacataaagtacgtggtggacagcgggcgcgtgaagataaaa
ttcttcgacgcgaagaaggggagcagcgttttgaaggtcacgcagatatcgaaggacgcc
gccgctcagaggagtgggcgagccgggcgggaggcgcccgggcaggtctaccgcgtgtac
tccaaggaggactacgagggcatgaacccctttctgattcccgagattttccgctccgac
ctcacgcagatatacttggagctgaaggccatgaacgtgccgaacccgctgcagtttaac
ttcccggagaaccccaagaaggagctgctgctgcactccgcgaaggtgctcttccgaatc
aacgcaatcgacgtgcacaacaacctcaccgagctgggcaagaagatgtgcctcctccca
ctcagccccatttacgcaaacatgatgttgtgttccgtggagctccactgcatggacgaa
gtggccaccatcgtggccttcctaaactgcgagagcatattcttgaattacaacttttac
gacgatttgaaggtcctgggggaggattcggcgggggggggcgccgccaacgtgggtggt
gctaacccggatggtgctaacccggatggtgctaacccagatgacgccccccccgacccg
ccgctaaccgaaaagaacaaactcatcaacgtggcgcggaggaagctgatgcacccggat
ggagaccacctcaccctcctgcacattttttacctgtggcaggaagaggccacccccaac
gagcgaaaatatttctgcagtttatatgccctcaataatgaaacattacagcaggcacaa
aaaataaaagagcaaattttacaaataatgattagcaaaatgggtatttcagtctctcca
aagctacacatgcataagtgggaccaagtgctaatctgtctgtgcaagtcctgttttttt
aatgtggccagagcgacttccaaggcgaatgaattcattaatgtggtaacgaaaaccaag
ttgcagatccacccgtcctctactctttttagctcgcacatcaagccctccttcattttt
tattccgacgtagtgcagacgaagcggctgtacgcgcgcactgtcacgaaggtagagggg
gactggctgctcaaatatgcctcgcaaaattttaaacttgcgcaggcctccacgggggtg
gcggtggaaaaggagccccccgcgaagtga
DBGET
integrated database retrieval system
