Plasmodium vivax: PVX_090175
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Entry
PVX_090175 CDS
T01073
Name
(RefSeq) eukaryotic initiation factor, putative
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pvx
Plasmodium vivax
Pathway
pvx03013
Nucleocytoplasmic transport
pvx03015
mRNA surveillance pathway
pvx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVX_090175
09122 Translation
03013 Nucleocytoplasmic transport
PVX_090175
03015 mRNA surveillance pathway
PVX_090175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_090175
03041 Spliceosome [BR:
pvx03041
]
PVX_090175
03009 Ribosome biogenesis [BR:
pvx03009
]
PVX_090175
03012 Translation factors [BR:
pvx03012
]
PVX_090175
Enzymes [BR:
pvx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVX_090175
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PVX_090175
mRNA cycle factors
Stress granule specific factors
PVX_090175
Spliceosome [BR:
pvx03041
]
Complex C
Other components
EJC/TREX
PVX_090175
Ribosome biogenesis [BR:
pvx03009
]
Eukaryotic type
90S particles
Helicases
PVX_090175
Translation factors [BR:
pvx03012
]
Eukaryotic type
Initiation factors
eIF-4
PVX_090175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
BATS
AAA_30
Bac_DnaA
CMS1
NAT10_TcmA_helicase
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
5474418
NCBI-ProteinID:
XP_001615127
UniProt:
A0A1G4H998
A5K665
LinkDB
All DBs
Position
5:<1214128..>1215294
Genome browser
AA seq
388 aa
AA seq
DB search
MEESYKSSEKHEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILSGRDVILQSQ
SGTGKTCVFAVGALNCVNRNLSETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGG
KKMSDDIKALSNGVHIISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYD
IYRFLSPNTQIVLSSATLPQEVLEITNKFMHRPVKILVKRDELTLEGIKQFFVSIEKEQW
KYETLADLYESLTITQAVVFCNTKLKVDWLTKKMQEANFTVCKMHAGMSQSERDDIMLKF
RQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKN
DDIKILRDIEQYYSTQIDEMPMNITELL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagctacaaaagctcggagaagcacgaaatatgcacgagcttcgaaaacata
ggaattgacgaggggctgctgagggggatctacgcgtacggatttgaaaagccgtcggcc
atccagcagaggggcatcaaaccgattcttagcgggagagatgtcattctgcagagccaa
agtgggactggaaaaacgtgcgtctttgccgtgggcgcgctgaactgcgttaataggaat
ttgagcgaaacgcaggtgattatcctgtcgcctacgagggagctggcagagcagacgcag
aaggtttgtctcgccttggcagattacatccacgtaactatatactgttgcatagggggg
aagaaaatgagcgacgatataaaggcgttaagcaatggagtgcatatcattagtgggacc
ccagggagaatataccacatgctaaatttgaggcacttgaaatgtaaatatataaaacag
ctggtgattgacgaggcagatgaaatgctaaacaaagggttcaaagaacaggtctatgac
atctaccgtttcttgtctcccaacacgcagatcgtcctctcgtcagccaccctcccacag
gaggtattagaaatcacaaacaagtttatgcataggccggtgaaaatattagtaaagaga
gacgaactgactttggagggaatcaaacagttctttgtttcaatagaaaaggagcagtgg
aaatatgaaacgttagcagatctgtatgagagtttgaccatcacacaggctgttgtgttt
tgcaacaccaaattgaaggttgactggctcacgaagaagatgcaggaggctaacttcacc
gtttgtaaaatgcacgcagggatgagtcaaagtgaaagagacgatattatgctcaaattt
aggcagtgcaaattccgcgtacttatatctacagacatttggggaagggggctcgacgta
caggaggtctccctcgtcgttaactatgacctgcccaactctcgagagagctacatccac
cgcatcgggcgcagtggccgctttggccgcaagggcgtcgccatcaattttgtgaaaaac
gacgacataaagattctgcgggacatcgagcagtactactccacgcagatcgacgagatg
cccatgaacatcacggagttgctctga
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