Plasmodium vivax: PVX_090965
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Entry
PVX_090965 CDS
T01073
Name
(RefSeq) hypothetical protein, conserved
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pvx
Plasmodium vivax
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvx03016
]
PVX_090965
Enzymes [BR:
pvx01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
PVX_090965
Transfer RNA biogenesis [BR:
pvx03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
PVX_090965
Prokaryotic type
tRNA splicing ligases
PVX_090965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
5474482
NCBI-ProteinID:
XP_001615186
UniProt:
A0A1G4GX34
A5K481
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All DBs
Position
9:135191..136726
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AA seq
511 aa
AA seq
DB search
MKQGSRSEAGRGDIRSYILQGGEKNLYRIKKGLVPNMNVEGHMYVNDKLKHLIDDEIETY
QVNRNSTFLPAVVQIANVSTLPGIEKASIALPDVHAGYGFSIGNVAAFDMSNEKAIISPG
GVGFDINCGVRLIRTNLFYDDVKDKQEELTQLLFNNIPVGVGSQGCILCNQDKLDEALCL
GMDWCVKEGYAWVEDKLNCEDNGRSLYADSNHVSVRAKKRGITQMGTLGAGNHYAEIQIV
DEIYDRRSAKLMGIEKKNQVCVMIHSGSRGLGHQIATDALIEMEKSMAKYKLNVIDKQLA
CTPIHSTEGKNYLKAMGSACNFAWINRSSMTFLARQTFAKIFNQSPDDLDMHVIYDVSHN
IAKIEDHLVDGKRKKLLVHRKGSTRAFPPFHPAVPLDYQYCGQPILIGGTMGTYSYVLTG
TDKAMETTFGSTCHGAGRALSRNKSRNTLNYVDVLQKLKEENISIRVASPKLIMEEAPES
YKNVSEVVNTCHDAGISAKCFRLKPVAVIKG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggggagccgcagcgaagccgggcgcggagacatccgcagctacatcctccag
gggggggagaaaaacctttaccgaataaaaaaggggctggtcccaaacatgaacgtagaa
ggccacatgtacgtgaatgacaagttgaagcacctcatagacgacgaaatagaaacgtat
caggtgaatagaaactctacgttcctcccagcagttgttcaaatagcaaatgtgtctacc
ctgccaggcatcgaaaaagcgtcgatagccctaccagatgtacacgcgggttacggattc
tccataggaaacgtggcagcatttgacatgagcaatgaaaaggcgatcatctccccaggg
ggcgtcggatttgatataaactgcggagtgaggctaatcagaacaaacctcttttacgat
gatgtgaaggacaagcaggaagaattgacgcagctcctttttaataacatccccgtggga
gtaggctcacagggatgcatattatgcaatcaggacaagctagatgaagccctttgtttg
ggaatggactggtgtgtaaaggagggctacgcatgggtggaggataagttaaactgcgaa
gataatgggaggagtctctatgctgatagcaaccacgtatctgtgagagctaaaaaaagg
ggaattacacaaatggggactttgggagccgggaaccactacgcagagattcaaatcgtt
gacgaaatatacgacagaaggagtgccaaactgatggggatagaaaaaaagaaccaagtg
tgcgtgatgattcactccgggagtagagggctgggccatcaaattgctacggatgctctg
atcgagatggaaaagagcatggccaagtataagctaaacgtaattgacaaacagctagcc
tgtacccctatacactccacggagggaaagaattacctaaaagccatgggttctgcttgt
aattttgcctggatcaatagatcctccatgacctttttagctagacagaccttcgcaaaa
atttttaatcaatcaccagatgacctagacatgcatgttatatatgacgtgtctcataac
attgcaaagattgaagatcatctcgttgatgggaagagaaaaaaattgctagttcataga
aaggggtctaccagggcctttcctcccttccaccctgctgtgccgctagattaccagtac
tgcggacaacctattctcatcggaggaaccatgggcacctactcctatgtcctaactggt
actgacaaagctatggagaccaccttcggctcaacctgtcacggggccggacgggcacta
agccgaaataaaagcagaaacactctaaactacgtggacgttttgcaaaaactgaaggag
gaaaatatctccattcgagtcgcctccccgaagctgattatggaggaggcccccgagtcc
tacaagaacgtctccgaggtggtcaacacgtgccacgacgcgggcatctccgccaagtgc
tttcgcctcaagccggtcgcggtgataaaggggtga
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