Plasmodium vivax: PVX_091025
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Entry
PVX_091025 CDS
T01073
Name
(RefSeq) U6 snRNA associated Sm-like protein Lsm4, putative
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pvx
Plasmodium vivax
Pathway
pvx03018
RNA degradation
pvx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVX_091025
09123 Folding, sorting and degradation
03018 RNA degradation
PVX_091025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_091025
03041 Spliceosome [BR:
pvx03041
]
PVX_091025
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PVX_091025
mRNA degradation factors
5'-3' decay
Lsm complex
PVX_091025
Spliceosome [BR:
pvx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PVX_091025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF2518
SM-ATX
Motif
Other DBs
NCBI-GeneID:
5474494
NCBI-ProteinID:
XP_001615198
UniProt:
A0A1G4HCD8
A5K493
LinkDB
All DBs
Position
9:179286..180121
Genome browser
AA seq
127 aa
AA seq
DB search
MVFPLTLLKCSQNQPVMVELKNGETYSGFLVFCDRFMNLHMKNIICTSKDGDKFWKISEC
YVRGNSVKYIRVQDQAIDQAIEETNEQKARNIGSRGRGGRGRGRGSGRGTDNRGGRGGQM
RGGRRGF
NT seq
384 nt
NT seq
+upstream
nt +downstream
nt
atggtgttccccttaacgttgctgaagtgctcgcaaaaccagccggtgatggtggagctg
aaaaatggagaaacgtacagcggcttcctcgtgttttgcgatcgctttatgaatttacac
atgaaaaatataatatgcacgtcaaaggatggagacaaattttggaaaatctccgaatgt
tacgtcagggggaacagcgttaaatatattcgagttcaggaccaggccatcgatcaagcc
atagaggaaaccaacgaacaaaaagcgagaaatataggtagtagaggccgaggaggaaga
ggtaggggacgcgggtctggcaggggcacagacaacaggggtggaagaggaggtcaaatg
cgaggaggaagaaggggattttaa
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