Plasmodium vivax: PVX_094465
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Entry
PVX_094465 CDS
T01073
Name
(RefSeq) regulator of nonsense transcripts, putative
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
pvx
Plasmodium vivax
Pathway
pvx03013
Nucleocytoplasmic transport
pvx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVX_094465
03015 mRNA surveillance pathway
PVX_094465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_094465
Enzymes [BR:
pvx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PVX_094465
5.6.2.5 RNA 5'-3' helicase
PVX_094465
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PVX_094465
mRNA cycle factors
Common to processing body (P body) and stress granule
PVX_094465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
UPF1_Zn_bind
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
UvrD-helicase
NPHP3_N
PhoH
SLFN-g3_helicase
SRP54
Helicase_RecD
AAA_22
DEAD
nSTAND3
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
5473650
NCBI-ProteinID:
XP_001614361
UniProt:
A5K775
LinkDB
All DBs
Position
8:complement(268169..272788)
Genome browser
AA seq
1539 aa
AA seq
DB search
MENTFDYNQIDVDDFDDFYNFCTLKGKKKNGKKIAEQFFQTGGESGADVVDGGEGGEDGT
DNSSVDTTTVYKEGSKKSRPTGKKSKPARRTRNASHEKRLDDVQGEEEDHLMGRRALELD
HRYGYVDDGLHESGGDIALEDESLAEERIAKYGKTDAWNNLGCKKKKKKNQQRDTQNMGF
NNPHSNHNEKGHSLQERSSCGDRTSNRYVSLPREDYEQDKKKMYEDYNARGKYPRECSQY
SNSNCDSYSYSVDMACASKGNKEKPKYFRCRYCEMDSVDSVVQCNTCNRWFCNGSYGTCG
SHIVTHLVRSKHKEIKLHKKSLLGETILECYNCGCKNVFLLGFLPTPEEGVVVIICRDPC
LARCISLSGRGEAEQERVTQEGGKQTDGQPADGPQADGPQAYGQQADAPQTDGPQANGKG
HPAELKDPPEREPKEKKKGLPYEHFHGEDDPISTDEDDVASTKEDTNMVKNKGYLSSDDF
GYTSEQEKGSSAGGSSLNRFAAKKGQNGKEKTEQTEQTEQTEQDVKSKDSEDASNYCATV
GNNLKELIKMKDWDLNKWQPVIEDRCLLDWLVNIPTAEEAERKGKRTTSYNVNKLEELWK
NKKDVYIDELDGEILNDEPVKVELRYEDAYHYQSIFAPLIQLEADYDKSIKEGQKQANVT
VRWDIGLNKKRYAHFIYVKEESELRLVAGDELKLSYTYPNGTVWSCEGHISRIHNTEEIA
LELRTSSTANGPWVNNITTGYAVEFVWKSTAYDRMQLALNEFAQNSYSLSGYLYHKLLGH
EVSEESLNYYKTALSSQVHGKRSPPRIVNYSAPNLAALNHSQIDAIKKSLVSPLSLIQGP
PGTGKTLTCATLVYHLSKTKMGKVLVTAPSNVAVDQLSVRIHKTGLKVVRLCAKSREYVP
SIADYLYLHNQMKLLKSDIGEELNKLLELKEEVGELSQKDERRLKKLIFFAEYKILLEAD
VICTTCVGAMDKRLKRFRFSQVLVDEATQSTEPECLVPLVTGAKQIVLVGDHCQLGPIIV
CKKAANAGLGKSLFERLVMLGITPFRLEVQYRMHPALSEFPSYVFYDGCLQNGITLKERE
YPLKDFPWPNPKCPMFFYNSTGLEEMSASGTSYLNRAEASNMEKLVRTLISCGLKPTQIG
VITPYEGQRAYITSLFQKNISYQHSTEIEVASVDAFQGREKDFILLSCVRSNKKLGIGFL
NDPRRLNVALTRAKYGLIICGNAKVLSRHHVMIKKMHNSNETITNVNSVWINLLSQFKKK
ELIVEGCLSNLKPMNIHIPTPMKQPSRYINFSYFLPSERPPRAGAFPGRGSGRSGRSGRS
GRSGRSGGSDSSGGSGESDGSLPGSGDGKTQSSNTFMHMNTSNLSYCSDAVMNKEFLSYM
HQRQVGGAKQGVKSYVNNLSQLSQFNEDSIVNKNSPSDSFPNYEPAPSLSHSTKSYANPN
FLCYSNSGLSEDRNHVANHLVDSSFRENFGGGSFVRNSDLFPYQFYYGNDRDASSLHNGQ
GSHGSHHTRKPRIAGGHHGEIKQKLANTADVRRYRNRNV
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacgttcgactacaaccaaattgatgtggacgattttgacgacttttacaat
ttctgcactctgaaggggaaaaaaaaaaatgggaaaaaaattgccgagcagtttttccag
acgggtggagaaagcggggcagacgtggtggacggcggagagggcggcgaagacggcacg
gataactcctccgtagacaccaccaccgtgtacaaagaaggaagcaagaaaagtaggccc
actggaaagaagagcaaaccagcacgacggactcgcaacgcttcgcatgagaagaggctg
gatgatgtgcagggagaggaagaggaccacctgatggggaggagagctctcgaattggac
cacagatacggatacgtagatgatggccttcacgaaagcggtggtgacatcgcactggag
gatgaaagtttggcagaggagcgcattgctaagtatggtaaaactgacgcgtggaataac
ttgggatgcaaaaaaaaaaaaaaaaaaaaccaacagagggatacacaaaacatgggcttc
aacaacccacacagtaaccataacgagaaggggcactccctccaggagagaagcagctgt
ggggaccgaacgtccaacaggtatgttagcttgcccagggaggactacgaacaggataaa
aaaaaaatgtacgaagattacaatgccagggggaagtacccaagggagtgcagccagtac
tccaacagcaactgcgatagttacagctatagtgttgacatggcatgcgccagtaagggg
aataaagaaaagccaaaatattttcgatgccgttactgtgaaatggattctgtggacagt
gtggttcagtgcaacacgtgcaatcgatggttctgcaatgggtcctatggcacgtgtggc
agccacatcgtcacgcacctggtgaggtccaagcacaaggagattaagcttcataagaag
agcctgctgggtgaaaccatcctggagtgctacaactgcgggtgcaagaatgtgtttttg
ctggggttcctacccacgcctgaggagggggtcgtcgtcatcatatgcagggatccgtgc
ttggccaggtgcatttcgctgagcgggaggggcgaagcggaacaggagcgggtcacccaa
gagggggggaagcaaacagatgggcagccagcagatgggccgcaagcagatggaccgcaa
gcatatgggcagcaagcagatgcgccgcaaacagatgggccgcaagcaaatgggaaggga
caccccgccgaactgaaggaccccccggagagagagcccaaggagaagaaaaagggcctc
ccgtacgaacatttccacggggaagatgacccaatcagcacggatgaagatgacgttgcg
agcacgaaggaagacacgaatatggtgaagaacaagggatacctaagcagcgacgatttt
gggtacacgagtgagcaggaaaaggggagctccgcgggaggaagttccctcaacaggttt
gcagcgaagaagggtcaaaatggaaaggaaaaaacggagcaaacggagcaaacggagcaa
acggagcaggatgtgaaatcgaaggactcggaggacgcaagcaactattgcgcaactgta
ggaaacaacctaaaggagctaataaagatgaaggactgggacctgaacaaatggcaacca
gtgattgaggacaggtgtctgctcgactggctagtaaacatccccacggcggaagaagca
gagaggaaaggaaagagaaccacatcgtataatgtaaacaagctagaagagctatggaaa
aataaaaaagacgtgtatatagatgagctagatggagagattctaaatgatgaacccgtt
aaggtggagctaaggtatgaagatgcctaccattaccagtccatctttgcacccttaatt
cagttggaagctgattatgacaaatcgattaaggaggggcagaagcaggctaatgtgacc
gtccggtgggatatagggttgaacaaaaaaagatatgcccattttatttacgtgaaggag
gaaagtgagttaaggttggtagcaggagatgagctaaagctgtcctacacatatcctaac
ggaacggtgtggagttgcgaagggcacatttccagaattcacaacacggaggaaatagcc
ctagagttgagaacctccagtacggccaacgggccatgggtaaacaacataaccactggg
tacgccgtcgagtttgtgtggaaaagcaccgcgtacgatcgaatgcagttagcgttgaat
gagtttgcgcaaaattcctactcactcagtgggtatttgtaccataagctacttggccat
gaagtctcagaggagtcactcaattattacaaaacggcattgagcagtcaagtccatggg
aagaggtctcccccacgtatagtaaattactcagcccctaatttagccgcacttaatcac
tcacaaattgatgctataaagaaaagcttagtgtctcctttatccctcattcaagggcca
ccaggtacagggaaaacgctaacgtgtgccactctggtgtaccatctgtctaagacaaag
atgggcaaagtgttagtcactgccccgagtaacgtcgctgtggatcagctctctgtgagg
atccacaaaacggggttgaaggtggtacggctctgtgccaagagtagggagtacgtcccc
agcattgccgattacctctacctgcataatcaaatgaaattgctcaaatcggatattgga
gaggagttgaacaagctacttgagctgaaggaggaagttggggagctatcccagaaggac
gaaaggagattaaagaagctaatcttttttgcagagtataaaatactgctagaggcagat
gtgatatgtaccacctgtgtgggggccatggacaaacggttgaaacgattccggtttagt
caagtgctagttgatgaagcgacgcagtcaacagaaccggagtgcttagtacccctcgtg
acgggggctaagcagattgtactcgttggagaccactgccagttaggtcccataatagtt
tgtaaaaaggcagccaatgcagggttgggaaagagtcttttcgaacgattagtcatgttg
ggtatcacacccttcaggttagaagtccagtaccgtatgcacccagcgttaagtgagttc
ccatcgtatgtcttctatgatggttgcctccaaaatggtattacactaaaggagagagaa
taccctctgaaggacttcccatggccaaatccaaagtgccccatgtttttttataactcc
actgggttggaggaaatgtccgcttcagggacgagctacctaaacagagcagaagcctcc
aacatggaaaagctagtcaggaccctcatcagttgtggattgaagccaacccagataggg
gtaataacaccgtatgaggggcaaagggcttacataacttcccttttccaaaagaatatt
tcctatcaacactccacagagatagaggtggcctctgtggatgcatttcaggggagagaa
aaggacttcatcctcctctcttgtgttcgttcgaacaaaaaattgggaatcggtttttta
aatgacccaaggaggttaaacgtagctttgacgagggccaagtatggactgatcatctgt
ggcaatgcgaaggtgctctccagacaccacgtgatgataaagaaaatgcataactcgaat
gagaccatcacgaatgttaactctgtgtggattaacctcctcagccagtttaagaagaag
gaactcatcgtcgaggggtgcctgtccaatttgaagcccatgaacattcacattccgacc
ccgatgaagcagccctccaggtacatcaactttagttacttcctgccgagtgagcggccc
ccccgggcgggcgccttccccggcagggggagcggtagaagtggaagaagcggaagaagc
ggaagaagcggaagaagcggtgggagcgatagcagcggtggaagtggtgagagcgatggg
agcctccccggcagtggcgacggaaagacccaaagcagcaacacctttatgcacatgaac
acgtccaacctgagctactgcagtgacgcggtcatgaacaaggaattcctcagctacatg
caccaaaggcaagtaggcggagcgaagcagggggtaaaatcttacgtaaacaatttgagt
cagctctcccaatttaatgaagactctatagttaataaaaactccccaagtgatagcttc
cccaattatgagcctgccccttccctttcgcatagcacgaaaagttatgccaacccaaat
ttcctgtgctatagtaacagcggtttgagtgaggataggaaccatgtggccaaccacttg
gtggactcctcctttagagaaaacttcggcggaggcagcttcgtgaggaactcagatttg
ttcccctaccagttttactacggcaatgacagggacgcctccagtctgcacaatgggcag
ggctcccacgggtcgcatcatacacgcaaaccgcgcatcgctggcggccaccacggggag
attaaacagaaactagccaacacagcagatgtaaggagataccgaaatagaaatgtatga
DBGET
integrated database retrieval system
