| Entry |
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| Name |
(RefSeq) DNA-directed RNA polymerase II largest subunit, putative
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| KO |
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| Organism |
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pvx00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVX_095320
09124 Replication and repair
03420 Nucleotide excision repair
PVX_095320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pvx03021]
PVX_095320
03400 DNA repair and recombination proteins [BR:pvx03400]
PVX_095320
Enzymes [BR:pvx01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PVX_095320
Transcription machinery [BR:pvx03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PVX_095320
DNA repair and recombination proteins [BR:pvx03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PVX_095320
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(1000860..1007999)
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| AA seq |
2379 aa
MTVDLNVPYSACELKRVKRLELGVLDPEIIKKIGVCEIVNVDLYKDGLPREGGLNDIRMG
TIDYKTLCGTCNMNVKYCPGHFGYIELAKPMYHYGFMNVVLNVLRCVCYHCGRLLCNTSN
SKVKFIEKIKVNSLRLKRLSEVCQGIKVCDHSSPQEEDTLHLNDNSVDNFYNNDLSNLNV
NQQMLLNPNSYGNIFEIVNKEDVDCGCVQPKYSREGPNMFIQFLHSSEEDIDESKRKLSA
EEALDILKKIRKEEMPILGFNSDRCIPASLILTFIPIPPPCARPYVQYGNQRSEDDLTLK
LLDIVKTNIQLKRQTDRGAKSHVLQDLCALLQFHITTLFDNDIPGMPIATTRSKKPIKAI
RTRLKGKEGRLRGNLMGKRVDFSARTVITGDPNLNIDYIGVPKSVAMTLTFCETVTPLNY
DDLKKLVERGPYEWPGAKYIIRDNGTKYDLRHVRKNSERELEYGYKVERHMTDEDYILFN
RQPSLHKMSIMGHKAKILPYSTFRLNLAVTSPYNADFDGDEMNLHLAQSHETRSEIKHLM
IVQKQIVSPQGNKPVMGIVQDSLLAIRKFTRRDNFLTKEEVMSLLIWIPYWNHVIPTPAI
MKPKALWTGKQIFSMLLQFEDLERLNDPLGNAKMGATNASGFRVEDEMGRGNSGGSGAHL
HPHSPLAIGDTLSGNVKNQATINEATRTNSTDGAFKGGISGWGRNVKINLMRDSSTSCKD
DNPYCSVNDGKVIIKNNELLCGIICKRTVGSSSGSLIHILWHEMGPDKTKDFISALQKVT
NNWLEYIGFTVSCSDIIASNKVLDKVKDILSKSKKEVSKIVKKAQRGELECQPGKSLYES
FETRVNNELNCAREMAGKVASESLDERNNIFSMVASGSKGSIINISQIISCVGQQNVEGK
RIPFGFNHRSLPHFIKFDYGPESRGFVSNSYLSGLTPQEVFFHAMGGREGIIDTACKTSE
TGYIQRRLIKAMEDVMVQYDRTVRNSYGDIIQFLYGEDGMAGEYIEDQIIDLMKLDNKEV
KKLYKYNFDDDEDDDREDSYGKDYYLKGGQHRKGSYMEYSKQNVLNQEFEELLKCKNNIC
KEIFPDGDVRQHLPINMNRLIEFAKSQFPFVPVLGGKVKDPIGASGMGPKRGKLKKREEK
KGKNKKKKEKKATPSHDQAKAASAASNADAALGDPTDELRNSEFVSEIKKEYEANELAGA
MKGQGAYSGFEPFDEDLAEGSAEEGGDEGSGEEDSDGNESGEESGDEGSGDDRSLVNPVD
IVHKVNRFLEKLVIIKQINSNDTLSLEAQNNATVLLKAHLRTYLNSKLLTQTHKISMKGI
DWLLQEIEKNFYKSLCHPGECVGALAAQSIGEPATQMTLNTFHFAGVGSKNVTLGVPRLK
ELINIVKNVKTPSTTIYLDDVVSNDQQKAKDILTKLEYTTLKQLTSHAQIIYDPNTTSTI
LEEDKLWVDEFYEFPDEDDTQYTLGEWVLRIQLTNIHVNEKKLTMKEIVYIIYSVFSSDE
LDIIYTDDNSEDLILRIRVKYLNGEYNFLNDDPDQAQEDEYEEEEEEEEEEENYNIGNTF
KAKKNVEADGNQTTQSKKNDKDDNQSVSSNRSRNNSVNSENRFGSANGSASGTESEDDDG
AGNPHRDEAAVKDKTGKGKSATKMKKLKEESANRADSNYVEGYEEADLFVKGEGRSGESA
VGSGVGSGAANGAANVAPNGTTEDMFGKANLNGEEDALAAKGRSSLSGANAGGGTTGGNA
PSGNNANSLDMNSMRNITNLSNPVYMKEDTEDTFLKKLMEQCLSTLKLRGIENITKVYMR
EESKITYDSTNGKFVRSSHWVLDTDGCNLEHIFCASHVDYKKTVSNDIVEIFEVLGIEAV
RRALLKELRTVISFDSSYVNYRHLSILCDVMTQRGYLMSITRHGINRVDRGPLVKCSFEE
TVEILLEAAAFAQVDNLKGITENIMLGQLCKIGTGVFDIIIDNQKLSDANQNLETLMDIT
SAGFTTPDSHHGITPDGLQSPVAINTLNSPLPFSPTYNVNLLSPTAPLDSVNGILSPQCL
QNYGDGSGGGESIMSPSKNDFNNLDTLKLGGKFSPTQSPKSPTSVIHSPFSPFDNHNQQA
LDPSMLFSPKNNNVGSSSNSMSMMNYNVFSPKANLNSIQSPAMLYSPNRALDLFSPKQQT
QNNIYSPSYSPTSPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVV
SPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVP
NNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPAYILQSPVQVKQ
HIQDVSVFSPIQQANAEEVQNDDPFSPMPYNMEEDEMEQ |
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| NT seq |
7140 nt +upstreamnt +downstreamnt
atgacggtggacctgaacgtgccctactcggcgtgcgagctgaagagggtgaagcgcctg
gagctgggcgtgctggacccagaaattataaaaaaaataggcgtgtgcgaaattgtgaac
gtggatctgtacaaagatggcttgccaagggagggaggcctaaacgacatccgcatgggg
accatagactacaaaactttgtgcgggacgtgcaacatgaacgtgaaatattgcccaggc
cactttggctacattgagctagccaaaccgatgtaccactacgggttcatgaacgtagtg
ctgaatgtgctaaggtgcgtgtgctaccactgtgggaggctactgtgcaatacgagcaac
tccaaggtgaagttcatagagaaaataaaggtgaacagtttgaggctgaagagactgtcg
gaggtgtgccaagggatcaaagtgtgcgaccactcctctccacaggaggaggacacgtta
cacctgaatgataactcggtggacaatttttataataacgatttgagcaacttaaatgta
aatcagcaaatgcttttaaaccccaacagctacggtaacatcttcgagattgttaataag
gaagacgtggactgtgggtgtgtacagcccaagtactccagggaaggaccaaacatgttc
attcagtttttgcactctagtgaagaagacatagatgagagtaagaggaaattaagtgca
gaagaagcattagatattttgaagaaaattagaaaagaagaaatgccaattttaggattc
aattcagataggtgtatccccgcatccttaattttgacattcatcccgattcctcccccg
tgtgcgaggccttacgtacagtatggcaaccagaggagtgaagacgacctgactttgaag
ctgctagacattgttaaaacgaacatacagctgaagaggcaaacggataggggggccaaa
tcgcatgttctgcaggatctttgtgccctcctacaatttcatattaccaccctatttgat
aatgatatcccggggatgcccattgcgactacccgttcgaagaagccaattaaagccata
cggaccaggctgaaggggaaggaaggaaggctcagaggaaatctaatgggaaagcgtgtg
gacttctctgccagaacagtcattacaggagatccaaatttgaacatagactacatagga
gtgcccaaatcagtcgccatgacgttgacgttctgcgaaacggtgactccactcaattac
gatgatttgaagaagctcgtggaaagagggccctacgaatggccaggagccaagtatatc
attagggataacggaaccaagtatgaccttaggcatgtaaggaagaactcagagagggaa
ctagaatatggctacaaagtggagaggcacatgacagacgaggattacatcctcttcaat
cggcagccttcgcttcacaaaatgagtatcatggggcataaggcaaagatactgccctac
tccacgttcaggcttaacttagctgttacttccccgtacaatgccgatttcgatggagac
gaaatgaatctgcaccttgcgcagtctcatgagactaggtccgaaattaagcacctcatg
attgtgcagaagcagatcgtctctcctcaggggaacaagcccgttatgggaattgtacag
gactccctcttggccataaggaaattcacaaggagggataacttcctcacaaaggaagaa
gtcatgtctttgctcatctggattccctactggaatcacgtgatacccactcctgctatt
atgaagccgaaggccctgtggacgggaaagcagatcttctctatgctcctccagtttgaa
gatttggaaagactcaacgatccgctgggcaacgccaagatgggggctaccaacgcgagc
gggttcagagtggaagacgaaatgggtcgagggaacagcggtggtagtggcgcacacctc
cacccacatagccccctagccattggagacacgctaagcggtaatgtgaaaaatcaagct
actataaacgaagcgacacgcacgaacagtacagatggtgcattcaaggggggtattagc
ggctgggggaggaatgtaaaaatcaacctgatgagggactcctccacctcgtgtaaggac
gacaatccgtattgctccgtcaacgatgggaaggtgattataaagaataacgagctcttg
tgtggaattatttgcaaacgcacggtgggttcttccagcggatcgctgattcacattttg
tggcatgaaatggggccagataagaccaaagatttcatttccgccctgcagaaggtcacc
aacaactggttagagtacatcgggttcaccgtcagctgctcggacatcatagctagtaac
aaggtcctcgataaggtgaaagatattcttagtaagtccaaaaaggaggtgtccaaaatt
gtgaagaaggcgcaaagaggggagttggaatgccagccgggcaagtccctctacgaatct
ttcgaaacgagggtaaacaacgagctgaactgtgcccgagaaatggcaggaaaggtggcc
tcagaaagtttagacgaaaggaataacatcttcagcatggtggcgagtggctccaaagga
tccatcatcaacatctcgcaaatcatatcctgtgtgggccagcaaaatgtggaggggaag
cgaattcccttcggatttaaccacaggtcgctgccccattttataaaatttgattacggt
ccagaaagcagaggctttgtctccaattcgtatttaagtggactcaccccacaggaagtt
ttctttcatgccatgggaggaagagaaggtatcatagacacggcgtgcaagacgtccgaa
acgggttacattcaaaggaggctaatcaaagccatggaggacgtcatggtgcagtacgat
cgaactgttaggaattcctatggggatattattcagttcctctatggggaggatggaatg
gctggagagtatatagaagaccaaataattgatttgatgaagctggacaataaggaggtg
aaaaaattgtataaatataactttgacgatgatgaggatgacgatcgtgaagacagctac
gggaaggactactacctgaaggggggccaacacaggaaaggctcctacatggagtacagc
aagcagaatgtgctgaatcaggaattcgaggagctcctaaaatgtaagaataacatctgc
aaggagatattccccgacggggatgtaaggcagcacctgcccatcaacatgaaccggctc
atcgagtttgccaagtcgcagttccccttcgtgcccgttctggggggcaaggtgaaggac
cccattggtgcgagtggtatggggccgaagaggggcaaactgaagaagagggaggagaag
aaggggaagaataagaagaagaaggagaagaaggcgaccccttcccacgatcaggcgaag
gcggccagcgccgcgtccaacgccgacgcggcgctgggagaccccaccgacgagctgcgc
aacagcgaattcgtgtcggagatcaagaaggagtacgaggcgaacgaactcgccggcgcc
atgaaggggcagggcgcgtacagcggcttcgagcccttcgacgaggacctcgcggagggg
agcgctgaagaaggcggtgacgagggaagcggtgaagaggatagcgatggcaacgaaagt
ggcgaggaaagcggtgacgagggaagtggcgacgaccgctccctcgtcaaccccgtggac
atcgtgcacaaagtcaaccgcttcctagaaaaactagtcatcatcaaacaaatcaacagc
aacgacacgctctcgctggaggcccagaacaacgccacggtgctgctgaaggcccaccta
agaacctacctgaattcgaagctcctgacgcagacccacaagatcagcatgaagggcatc
gactggcttctgcaagaaattgagaagaatttctacaagtcgctgtgccaccccggagag
tgcgtgggcgccttggcagcccagtcgataggagagcccgccacgcagatgacgctcaat
accttccacttcgccggagtggggtccaaaaacgtaacgttaggggtgcccagattgaag
gagttaattaacattgtaaagaatgtgaagaccccctccacgacgatctacctagacgat
gtcgtgtccaatgatcagcagaaagccaaggatattttaaccaaactggaatacacaact
ctgaagcaactaacatcacacgctcaaattatttacgaccctaacacgacgagtaccatt
ttggaagaggacaaactgtgggtcgacgagttctacgaatttccagatgaagatgacaca
cagtatacactaggagaatgggttctacggattcagctaaccaatattcacgtgaatgag
aaaaagctaaccatgaaggaaatcgtctacatcatttactccgtcttttccagtgacgag
ctggacatcatctacacggatgataactcggaagaccttatcctaagaattagggttaaa
tacctaaatggggaatacaactttctcaatgacgacccggaccaggcgcaggaggatgaa
tatgaagaggaagaagaggaagaggaggaggaagaaaactacaacattgggaacaccttc
aaggcgaagaagaacgtcgaggcggatggcaaccagaccacacagagcaagaaaaatgat
aaggacgataaccaaagcgttagtagcaaccgctccaggaataacagcgtgaatagtgag
aaccgatttggaagtgccaacgggagtgcgagcggtacggagagtgaagacgacgatggg
gcggggaatccccatcgggatgaagcagcggtgaaggataaaacgggcaaggggaagagt
gccactaaaatgaagaaactcaaggaggaaagtgccaaccgggcggatagcaactacgtt
gaggggtacgaagaagcggacttgttcgtcaaaggggagggcagaagtggagagagcgcc
gtcgggagtggagttggaagtggtgccgcaaatggcgccgcgaatgtcgccccaaatggc
accacggaggacatgttcgggaaggccaacttaaacggagaggaagatgccctcgccgcg
aagggcagaagcagcctcagcggcgccaacgcgggtggaggcaccacgggtggaaatgcc
cccagtggaaataatgcaaacagtctagatatgaacagcatgaggaatataaccaatttg
agcaaccccgtttacatgaaggaagacacagaagatacctttttgaagaagctgatggag
cagtgcctatcgacgttaaagttgaggggaatagaaaacattaccaaagtgtacatgcga
gaagagtccaaaattacttacgactcgaccaatgggaaatttgtgaggagttcccactgg
gtcttagacacagatggctgcaatttggagcacatcttctgtgcttcccacgtggattat
aagaaaaccgtttcaaatgatatagtagaaatatttgaagtgttaggaatagaggcggtg
aggagagctctcctaaaagaattgagaacagtcatttcgtttgatagctcctatgtgaat
tacagacatttgtctatcctctgcgatgtgatgactcagaggggttacctaatgtccatc
acgagacatggcatcaatagggtagatagaggtcctctagtcaagtgcagctttgaagag
acggtggaaatactcctagaagcagctgcctttgcacaggtagataacctcaaaggaata
acagagaatatcatgctgggccagttgtgcaaaataggcaccggcgtcttcgacatcatt
atagacaatcagaagctgagtgatgccaatcaaaatttagaaactctgatggatattacc
agcgctgggtttaccaccccagatagtcaccatggaatcactccagatgggttacaatca
ccggtagcaattaacacgctaaactctccgcttcccttctccccaacgtataatgtaaat
ttgctatcgcctacggctcctctagacagcgtcaacggtattttatcccctcaatgtctg
cagaactatggggatggaagtggtggaggtgaaagtatcatgtctccttccaaaaacgac
tttaacaatttggacacgctaaaattggggggcaaattctctcctacgcaatctcccaaa
tcacccacgtcggttatccactcccccttctctccctttgataatcacaaccagcaagca
ctcgatcccagcatgctcttctctccaaagaataacaacgtcggcagcagtagtaacagc
atgtctatgatgaattacaatgtgttttcccccaaggcaaatttgaatagcatacagtcg
cctgccatgctgtactctcctaatcgcgctttagacttattttcccccaagcagcagacg
cagaacaatatttactccccttcctactcgcccacctctcccacgtaccacctgaccaac
cctgccagtggtggaggctcctccggcttgaacggcacgaaggcgtattactccccgacg
tctccaacgaatcagctggacgaggtgaaccccaatatgatgaaataccacagcgtcgtt
tcgcccgtctactcggttacctccccgaagtactcgcccacctcgcccaagtattcgccc
acctcgcccaagtattcgcccacctcgcccaagtactcgccaacctctcccaagtactcg
cccacttcccctaagtactcgcccacgtcgccgcagtactccccctcgtcgcccgttccg
aacaaccccagcagcccccactactccccctacgccatagcgtctcccaaattctcgccc
acctcccccgcgtactccatctcctcccctgtgtacgaccaaagcggcaacgccaggagc
aagagccagcaccccctctccccggcctacatcctgcagtcccccgtgcaggtcaagcag
cacatccaggacgtcagcgtcttctcgcccatccagcaggccaatgcggaggaggtgcag
aacgatgaccccttctccccgatgccctacaacatggaggaggacgaaatggagcagtga |
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