Plasmodium vivax: PVX_096320
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Entry
PVX_096320 CDS
T01073
Name
(RefSeq) hypothetical protein, conserved
KO
K07573
exosome complex component CSL4
Organism
pvx
Plasmodium vivax
Pathway
pvx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVX_096320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_096320
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PVX_096320
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PVX_096320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
DUF6686
Motif
Other DBs
NCBI-GeneID:
5472065
NCBI-ProteinID:
XP_001612818
UniProt:
A0A1G4GS26
A5KC73
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All DBs
Position
3:604441..605599
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AA seq
189 aa
AA seq
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MDSIVLPGEALGSCDAYVSGENTYSLQKEVRSAILGRRQLTTNGDGKQVISVANTKEFIP
LPQVGDLVTCKVYRVTFNLIYCNIILLNSKAVRNSFRAFINKSDIHVYEGELGDNFECFK
QGDIIRAKVLSVAQHGSYKLSTVGSDLGVILALSDGGQIMKPVAWNLMVNLSDMTFEKRK
VSSDFSVPL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggactccatcgtgctgcccggggaagccctcgggagctgcgacgcgtacgtcagcggc
gaaaacacatacagcctgcagaaggaggtgaggtcggcgatcctggggagaaggcagctg
acgacgaacggagatgggaagcaagtcatcagcgtggcgaacacaaaggagttcatcccg
ctgccacaagtaggagacttggtgacgtgtaaagtgtatcgagtcaccttcaacctcatc
tactgtaacattattctgctgaatagcaaagcagtgagaaactccttcagagcattcatt
aacaagagcgacatccatgtgtacgaaggagagttgggagacaactttgagtgctttaag
cagggggatataattcgggcgaaggtcctttcggtggcccagcatgggtcttacaagctg
tccaccgtgggctccgacttgggggtcatcttggccctcagcgatgggggtcaaatcatg
aagcccgtggcctggaacctgatggtcaacctgagcgacatgaccttcgagaagcggaag
gtctccagcgacttctccgtccccctgtga
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