Plasmodium vivax: PVX_097835
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Entry
PVX_097835 CDS
T01073
Name
(RefSeq) DNA repair protein, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
pvx
Plasmodium vivax
Pathway
pvx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PVX_097835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvx03400
]
PVX_097835
DNA repair and recombination proteins [BR:
pvx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PVX_097835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
5472483
NCBI-ProteinID:
XP_001613227
UniProt:
A5KAY3
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All DBs
Position
10:1101553..1105422
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AA seq
1289 aa
AA seq
DB search
MADFSKSNSAGPANKKQASILSFFKTQDGKGKKATGAGGEAAKEGKGDADKQGGQQLNAA
MSTLDKFAANAGNEAERSCETGFTAMKEPSEDKRNGCCACAETPQANLFSDDSQDVSRSA
VRSSMGKKGTEMKESYDKGYTDNAELSTEEDIIVRKKRKVIIDSSSEDVYDGSNDRSEDN
GKNSKRKGPPGNEGVGVDGKLNNLVYEPGKSSTTEETLFTNEQSSKEIINIHRRKGEDGK
KSQELDTLRNKLLSMPICLSNDKFRLYVEQYFLYCNTFEFPKWVQPQYVRDLNLRTPDNA
DYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMGRFYEIFYIDAC
LMHTICGLNWMGGEQKPHLGFPEQSLHLYAKKVINSGHKVVVIEQMETPKELEQRNKETC
GPKDKAIKREINEIFTKGTILHDNMLSSETKYLVCFHFDDIEDLDGGVVDVGVGGVGSLP
GSSSQSDRSVKSKCNFGFVVSDIATSYIAVGYCNDDESRIELRTILAQLCPAEILYASKN
INKEVLSIFKNIPAEPELTAVSSFPNIIASLDEIRKYFETIPPSLEMHREQNSVICAFGG
FIVYLRSLLLDKKIFRFCKIEHYDLFKRENYMVLDATALKHLEILETQSGETKNSLFDYV
NKTCTNFGARNMRRWICSPLLDCTRINERLDVVEFLKKNEHILSLIRLKLKKLPDIERLL
NKICIQASQSERGAVFFDNIVSTKLKEFMTFLNAFKEIGSMLIEINSIEKDEEELPKRLY
EISNTPDRKSLLRKVQGSYPHIEQITNEFLKKIEFDGDKEYKPAEGCDEAIDLINSKEKE
IEGELTNILTNMKRNMKISSLKYVHAKYKYEVECPENVPKHFLKHVEITSAKKGFIRFQN
DEIKQCVEMLEDIDQEKKDAIYPFFKKMFHLFYAHYEKYVSACRLVSELDCLQAFAFVAL
NTPFALTRPVLHPMRRNGSGEGESGEESSGQEVTAEQINQSSRSAVSAVCRGGTAHGKEP
FLILENNIHPVVATLMPNFISNNIYMGCEQEKQSTLLLTGPNMGGKSTLLRQTAISVILA
QIGAFVPSTYCELTVVDKIFTRLGSSDNLFEGKSTFLVELEDISNMLKQSTKYSLAILDE
LGRGTSSFDGTAIALSTLEQISDVVKCRCIFSTHYHLLVEEVKHNKKISNYHMSLSIDDH
QEKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLAHEKSTLFENVTDEFCKIIKYKNI
VRSLLSAPDGENLGALFRRYRAEFAEFAA
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcagcaagtcgaactccgccgggccggcgaacaaaaagcaggcgtccatt
ctgagcttcttcaagacgcaggatggcaaggggaagaaggccaccggcgcagggggggag
gcggccaaggaaggcaaaggggatgcagataagcagggcggccagcaactaaacgcggcg
atgagcacgctggacaaatttgccgccaatgcggggaacgaagcagagcgaagctgcgaa
acgggcttcaccgcgatgaaggagccctccgaggataagcgaaatggatgctgcgcatgc
gcagagaccccccaagcgaatctcttctccgatgacagccaagatgtgagcagaagcgcg
gtgagaagctccatggggaaaaaaggaaccgaaatgaaggagagttacgataaggggtat
acggacaacgcggagttgagcacagaagaggacataatcgtgaggaagaagcgaaaggtc
ataatagattcctcaagtgaagatgtgtatgacgggtctaacgacagaagtgaggataat
ggaaagaactccaagaggaagggacccccaggaaatgaaggcgttggcgtggatgggaag
ttaaataacctggtttatgagccgggtaagagcagcacaacggaggagacactattcacc
aacgagcagagctcaaaggagattataaacatccaccgtaggaagggagaggacggaaag
aagtcccaagagctggacacactaaggaataagctgctaagcatgccaatatgtttgtca
aatgataagttcagactatacgtagagcagtacttcctctactgcaatacttttgaattc
cccaaatgggtacagccgcaatacgtgcgtgatcttaatttgaggaccccagataatgct
gattatgactgctctaccatttggacgcccccacctgatcacccctgggcggtggagtac
aaacaggcgcactacactccagggatgcaacaattttggaaaataaaatccaaaaatttt
gataaaataatattttttaaaatggggagattttacgaaatattttacatcgatgcttgt
ttgatgcacaccatttgtgggttgaattggatgggtggggagcagaagcctcacttgggg
tttccagagcaatctctccatttgtatgccaaaaaggttattaacagtgggcacaaggtg
gttgtgattgagcagatggagactccaaaggagttggagcagcgcaataaggagacttgc
gggccgaaggataaagccattaaaagggaaattaatgaaatttttacaaaggggaccatt
ctgcatgataacatgctcagctcggagacgaaatatttggtttgcttccacttcgacgat
atagaagatttagatggaggagtagtagacgtgggggtcgggggagtgggcagcctccca
ggctcctcctctcaaagtgaccgctcagttaaaagcaagtgcaatttcggcttcgtcgtg
agcgacatcgcaacgtcgtacatcgctgtagggtattgcaacgatgacgagtcccggatc
gagttgcgaaccatcctcgcgcagctctgcccagcggaaattctatacgcttcaaaaaat
attaataaggaggtgctttccatttttaagaacatcccagcggaaccggaattgacagcg
gtgagctcatttccaaatataattgcctctctagatgagattagaaaatattttgaaacc
atcccccctagtttagaaatgcacagagaacagaacagtgtgatttgtgccttcggaggg
ttcatcgtttatctccggtcgcttctactagacaagaagatcttccgcttctgcaaaata
gagcactatgatttgtttaagagggaaaactacatggtgttggatgccaccgcgttgaag
cacttagaaatattggagacacaatctggcgaaacgaaaaattccctttttgattacgtg
aataagacatgcaccaactttggggccaggaacatgaggcgctggatctgcagcccgttg
ctcgactgcaccaggataaatgagcgactcgacgtggtggagtttttaaaaaaaaacgag
catatcttatccctcatcaggttgaagctgaagaagctaccagacatagaaaggctgctg
aacaaaatttgcatacaagcatctcaaagcgagcggggggccgtcttcttcgataacata
gtgagtacgaagctgaaggaatttatgaccttcctaaacgccttcaaagaaattggaagt
atgctaatcgaaatcaacagcatagaaaaggacgaggaggagttgcccaagcggctatat
gaaattagtaacacgccggatagaaagagtctactgagaaaggtccaagggagctaccca
catattgagcaaataaccaacgagtttttaaaaaaaatagaattcgatggggataaggaa
tataagccagcggaggggtgcgatgaagccatcgatttgattaacagtaaggagaaggag
atagagggggaacttaccaatattctaacaaacatgaagaggaacatgaagatttcgtca
ctcaaatatgtacatgctaagtacaaatacgaggtggagtgccccgagaatgtccccaag
cattttctaaagcatgtagaaattacctccgctaaaaagggattcattcggtttcaaaat
gatgaaataaagcagtgcgttgagatgctggaggatatagaccaggagaagaaggacgcc
atctaccccttctttaagaagatgtttcaccttttctatgctcactatgagaagtatgtc
tctgcctgtagactggtgtccgagctggactgcctccaggccttcgccttcgtggcgctc
aacacgcccttcgcgctgacgcgcccggtgttgcacccgatgaggaggaacggaagcggc
gagggggaaagcggtgaggagagtagcggccaggaggtcaccgcggagcagatcaaccaa
agtagtagaagcgccgtaagtgcagtttgccgtggggggaccgcccacgggaaagaaccc
ttcctcatcctcgaaaataacattcaccccgtagtggctaccctcatgcccaacttcatc
tcgaataacatctacatggggtgcgagcaggagaagcaatctactctgcttctaacaggt
cccaacatgggcggaaagagcaccctactaaggcaaacagccatttcggtaattttggcc
caaataggagccttcgtcccttctacctactgcgagttgaccgtagtggataagatattt
acgcgccttggatctagtgacaatctgttcgaaggaaaaagtacctttctcgtggagttg
gaggacatttcgaacatgctaaagcagagcactaagtacagtttggccattctggatgaa
ctgggtagaggcacctcctcctttgacggcacggctattgccctttcgactctggagcaa
atttcagacgtagtcaaatgcaggtgcatattctccacccattatcatctcctagtggag
gaagtaaaacacaacaaaaagatttcaaactatcatatgagtctaagcatagatgatcat
caggagaaaattatttttttatataaatttattaagggagtttgccccaagtcctttggt
attcacattgccaagttggctggcctccccaaagaaattattgatttggctcacgagaag
tccaccctctttgaaaacgtgacggacgagttttgcaaaatcatcaagtacaagaacatc
gtgcgctccctcctcagcgcccccgacggcgaaaatctgggcgccctcttccgcaggtac
cgcgccgagttcgccgagttcgccgcgtga
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