Plasmodium vivax: PVX_099300
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Entry
PVX_099300 CDS
T01073
Name
(RefSeq) ATP-dependant RNA helicase, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pvx
Plasmodium vivax
Pathway
pvx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVX_099300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvx03041
]
PVX_099300
03009 Ribosome biogenesis [BR:
pvx03009
]
PVX_099300
Enzymes [BR:
pvx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PVX_099300
Spliceosome [BR:
pvx03041
]
Complex A
U2 snRNP components
U2 related factors
PVX_099300
Complex B
PVX_099300
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
PVX_099300
Ribosome biogenesis [BR:
pvx03009
]
Eukaryotic type
90S particles
Helicases
PVX_099300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
ResIII
Flavi_DEAD
nSTAND3
AAA_19
AAA_7
ATPase
nSTAND_NTPase5
SLFN-g3_helicase
SRP54
NAT10_TcmA_helicase
TsaE
AAA_24
T2SSE
Roc
AAA_30
nSTAND6
TniB
AAA_29
Motif
Other DBs
NCBI-GeneID:
5474000
NCBI-ProteinID:
XP_001614709
UniProt:
A5K6P1
LinkDB
All DBs
Position
7:complement(660081..>662976)
Genome browser
AA seq
840 aa
AA seq
DB search
MNPVAEGPSEKDAGPANEQGDPPAPSENAKRKNEHTLSDDYSGRKKAKVGDELTADQYEE
GEEDKPTGGGQNEADVCSNDVEEDRGCQDKGGKKEGGEDKQGDHSSHEGNHDGGEKETHN
EYGGNEGVAQEEDPERQMCPRSDIPMGEASYQRGGEPGGAELEAHLINKLTNERYSERYL
QLLEEKKKLPAWSAKRNFLKLFKKNDVLIIVGDTGSGKTTQISQFVLESKFAEKKSIAVT
QPRRVAAMSVAARVSEELDVELGTYVGYTIRFEDRSSTKTVIKYLTDGMLLRESMYDPLL
KRYNTIILDEAHERTLATDILFGVIKNIQEQRNDLKLIVMSATLDAGKFQKFFNGSQILN
IPGRLYPVEIFYTLQAEKDYIRVVIRTVYDIHVNEDDGDILVFLTGEEEIEMTKKEIEKL
VSKNASAGQLIVLPLYSSLPSTQQQKIFEPAPRPRFKGDKMGRKCILSTNIAETSLTIEG
IVYVIDPGFSKQKVYNPRARVESLLIAPISKASAQQRAGRAGRTKPGKCFRLYTEKCFEQ
TLPEQTYPEILRSNLGSVVLNLKKLGIDDLVHFDFMDPPAPETLMRALEQLNYLGALDDE
GELTQKGHFMSEFPVDPQLAKVLIESPNYCCSSEILTIAAMLSVPYCFLRPKVKGKEADE
MKTRFSHLDGDHLTLMNVFHAFVNYSRVDISASKKFCYDYFLNHRAMTSAQNVRNQLIRT
MEKMDLKIVSMNPSSPDYYVNIRKALLSGFYQQVAYKTSKGYYITVKDIQIVTLHPSTVF
QINPEWVMYHELILTTKNFIRTVTKIDGKWLLEMARSYYDLEDLPNSEAKNELRMLLGKP
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagtggcggagggcccatccgaaaaggacgcggggcccgcgaacgagcagggg
gacccgccagccccaagtgaaaacgccaaaaggaaaaacgaacacacgttaagtgatgat
tatagcggtaggaagaaggcaaaggtgggcgatgagttaacggcagatcagtatgaagaa
ggtgaagaggataaaccaacagggggggggcaaaatgaggcagacgtctgctcaaacgat
gtggaggaggatcgtggatgtcaagacaagggcggtaagaaggaagggggtgaggacaaa
cagggtgaccacagcagtcatgagggtaaccacgatgggggggagaaggagacgcataat
gagtatggcggtaatgaaggagtggcccaggaggaggaccccgaaaggcaaatgtgccct
cgaagcgacatcccaatgggggaggcgtcctaccaaagggggggcgaacctggcggggcc
gaactggaagcccatctcataaacaaactgacgaacgaacgatacagcgagaggtacctc
caactgctggaagagaagaaaaaactgcccgcatggagcgcgaaaaggaactttctaaag
ctctttaaaaaaaacgacgtgctgatcatcgtgggagatacaggtagtggaaagacaacg
cagatatcccaatttgttttggagtccaaatttgcagaaaagaaatccattgcagtgacc
caaccgaggagagtagcagccatgagtgtagcagcgagagtttcagaagaattagatgta
gagctagggacgtacgtaggatacaccatcaggtttgaagatcggtcgagcaccaaaacg
gtcatcaaatatctgacggacggtatgctcttgagggaatctatgtatgaccctttattg
aaaagatacaacaccatcattttggatgaagctcacgagaggaccttagccacggacatc
ctcttcggagttataaaaaacatccaagagcagaggaacgatttaaaattaatagtcatg
tcagcaacgctagatgcgggcaaattccaaaaattttttaatggctcccaaattttgaat
atcccagggaggctatacccagtggagattttttataccctccaagcggagaaggattac
ataagggtggtcatcaggacggtgtatgacatccatgtgaatgaggacgatggagatata
ctcgtcttcctaaccggagaggaggaaatcgagatgacgaaaaaggagattgaaaaatta
gtttctaagaatgcgagtgctggccagctgatagtgctaccgctttactcctccctaccg
tcaactcagcaacagaagatattcgagcctgctccgaggccaagatttaaaggagacaaa
atggggaggaagtgcatcctgtctacgaacattgcagaaacgtccctcacaatagaagga
atcgtctacgtaatcgaccctgggttttcaaaacagaaggtgtataaccccagggcaaga
gtagaatctttgttaatcgcccccatttcgaaagcgtcagctcagcagagagcaggaaga
gcagggagaacaaaaccaggcaagtgctttcgcctctacacagaaaagtgcttcgagcaa
acattaccagaacagacctacccagaaatactgagatcgaacctaggctccgttgtctta
aatttaaaaaaattaggaatcgacgatttagttcattttgattttatggaccctccagca
ccagagacgctgatgagagccctagaacagctgaactacttgggggcattggatgacgag
ggagaattaacacagaagggacacttcatgtctgagttccccgtagatcctcagctagcc
aaagtgctaattgagtctccaaactattgctgctccagcgaaatactaaccatcgccgcg
atgctttccgtgccgtattgctttttaaggcctaaagtgaaaggcaaagaagcggacgaa
atgaaaacgagattctctcacctagatggagaccacctaactctaatgaatgtgtttcat
gcctttgtcaattatagccgagtcgatataagtgcttcgaaaaaattttgttacgattat
tttctaaaccatcgagctatgacatctgcccagaatgttaggaatcaactcatccggacg
atggaaaagatggacctaaaaatcgtctccatgaacccatccagccccgactactacgtc
aatattaggaaggccctcctcagtgggttctaccagcaagtggcttacaaaacgagcaag
gggtactacatcaccgtgaaggacatccaaatcgtcactttgcacccctcgacggtgttt
caaataaaccccgaatgggttatgtaccacgaacttatattaaccaccaaaaattttata
cggaccgtaacaaagattgatggcaagtggctgctcgaaatggctagaagctactatgat
ctggaggacctgccaaacagcgaggcgaagaatgagttacgcatgcttctggggaagccc
taa
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