Plasmodium vivax: PVX_101110
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Entry
PVX_101110 CDS
T01073
Name
(RefSeq) hypothetical protein, conserved
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pvx
Plasmodium vivax
Pathway
pvx03022
Basal transcription factors
pvx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVX_101110
09124 Replication and repair
03420 Nucleotide excision repair
PVX_101110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvx03021
]
PVX_101110
03400 DNA repair and recombination proteins [BR:
pvx03400
]
PVX_101110
Transcription machinery [BR:
pvx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVX_101110
DNA repair and recombination proteins [BR:
pvx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVX_101110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
DUF2457
Motif
Other DBs
NCBI-GeneID:
5473249
NCBI-ProteinID:
XP_001613968
UniProt:
A5K8U5
LinkDB
All DBs
Position
14:complement(2641925..2646098)
Genome browser
AA seq
960 aa
AA seq
DB search
MVRTRKNIENMEIYDYMKEMSEKIWTYLFEDSLAHEAILHSLNELEQIIISRLLFIQQVV
SERAMRLWINPNSLKKLSECIKNLVEAKILVESETKKDNYNQYKINEKFRHTMLNKIYKN
REDKIFIFNNNVKEQMEKEKNLHENNLYPTKEEVANYAHMRWNNLLHFIASPKLSHLNSY
MVYTNGISVEHRQEVYPPQTGLPVSRNDDKGDPNRNKNVDKGATSFNTPSKKGRKKSQAD
DEEYRPYGHSLYGGAAHNVVNYPAVKEEENEEEENEENDEGEDDDGEADEEDDEGDNSDN
EDHPAEGAKYEKGPNEDAKYDQYGYHLEQGESAGAPPIGSAHKLHTHEANQYYTHHSGRK
KKKKKKKKKKGVYAYKQNDLYYRSLQNVENGYPNGYPNGYSNGYPNGYPSGFPNGCPNGF
PEEDNNDNSFFYSNAKKDACPSYTPCDSLIEVLKRKNFILQDDANSNKAVNMSREAFSWF
LKDIRSRIISLVLEYLLIIDDGYVTNVAREISTKYKKKKNSSADAGIGGGSSANGPSAES
GYAGYTAYPEHGGSDNVYSDQISATHQEKPKNDGSAPPCYVTEEKKDQKKSELYVRETLL
LILSISQCTISHPIYLDNLTKAQKEFINFGIHIGLFLKRTEDYVFVTPYALLLTINNLNV
QNYVAVMNSLTVEGLSENAYNEYIAIGEDGVDNNLPSKSSNVVPSRSVDIARHGHTDGGE
KKISEKYFHHYSLLQEEKKRPPKRGSHQDMDKMKITHELASQHLSPEKKMNGSNILEMGL
IVQSNFKVYLYTNSTLKINILSHLCELQARTPNMVVGILTRRSVLNAYNSDITANQIIKF
LESYAHPGRSTFKSSIPVNVITQLKLWESERHRLTLDDAIVFKSFEKEFLPHLYQQIVVW
ANSKNYLLHYTPWPKNANSPEFDAWMKSEKYLCCIYESKNEIIDKIKEIREKLMKKRQGA
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggacgcggaaaaacatcgaaaatatggaaatttatgactacatgaaggaaatg
agtgaaaagatatggacctacctgttcgaagactcccttgcccatgaggccatattacat
tccctaaatgagttggaacaaattatcatctcgcgcctcttgttcatacagcaggtggtg
tccgagagagcaatgcgcctgtggataaacccaaactctctaaaaaaattaagtgaatgt
ataaaaaatttagtggaagcaaaaatactcgtagaaagcgaaaccaaaaaggataactac
aatcagtataaaataaatgaaaaatttagacataccatgctgaacaagatttataaaaat
agggaggataaaatcttcatctttaataataatgttaaggaacaaatggaaaaagaaaaa
aatctgcacgagaataatttatatcccacgaaggaagaagttgctaattatgcacacatg
aggtggaataatctgctccattttattgcctcccccaagttaagtcacctgaacagttac
atggtttacactaatggcatatctgtggagcacagacaggaggtctaccccccacagact
ggcttgccagtcagccgaaatgacgataagggtgatccgaataggaataaaaatgtagac
aaaggcgctacttcttttaataccccctcgaagaaaggaaggaaaaagagtcaggcggac
gatgaggagtaccgcccctatggacactccctgtacgggggagccgcccacaatgtggtg
aattaccccgcggtgaaggaggaggagaacgaggaggaggaaaatgaagaaaatgacgag
ggggaggatgacgacggggaggcggacgaggaggacgatgagggggacaactccgacaat
gaggaccacccggcggagggggcaaaatacgagaaaggcccaaacgaagacgccaagtat
gaccagtacgggtaccacctcgagcagggcgaatctgcgggagcccccccgattggaagc
gcacacaagctgcatacccatgaggcgaatcagtattatacccatcatagtgggaggaag
aagaaaaaaaagaagaagaagaagaaaaagggagtctatgcgtacaagcagaatgatctg
tactataggagtctgcagaatgtggaaaatggctacccaaatggttatccaaatggctac
tcaaatggctacccaaatggctacccaagtggcttcccaaatggctgcccaaatggcttc
ccagaggaagacaacaatgacaactcgtttttctactcaaatgcaaagaaggacgcctgc
ccgtcgtacaccccgtgcgatagcctaatcgaggtgctcaagagaaaaaacttcatactg
caagatgatgcgaatagcaacaaggcggtgaacatgagtcgggaggccttctcctggttc
ctgaaggatataagaagcaggatcatttccctggtgctcgaatatttgctcatcatagac
gacggctacgtcacaaacgttgcccgggaaatttccaccaagtataagaagaagaagaat
agcagcgcggacgctggtatcggcgggggaagttctgcgaatggcccgagtgcagaaagc
ggctacgctggttataccgcttaccccgagcatggcggaagcgacaacgtttacagtgac
caaatttcggcaacccatcaggagaagcctaaaaatgatggaagtgcacccccctgctac
gtgacggaagaaaagaaggaccagaagaaatcagaactgtatgtgagggaaaccctactg
ctgattctgtccatcagtcagtgcaccattagccaccccatatacctcgacaatttgacc
aaagcgcagaaggaatttataaattttggcatccacattggtctctttttaaagcgcacc
gaggactacgtgtttgtaactccctacgcgttgcttctaacgatcaataatttgaatgtg
cagaattacgtagctgtgatgaacagcctgacggttgaggggttgtccgaaaatgcctac
aacgagtatatcgcgattggagaggatggagtggataataatctccccagcaagagcagc
aacgttgtaccctcacgcagtgtagacatagccagacatggccacaccgatgggggggag
aagaagataagcgaaaagtactttcaccactactcccttttacaagaggaaaagaaaaga
ccacccaaaaggggctcccatcaagatatggacaaaatgaagataacacacgaattagct
agccagcatttatccccagaaaaaaaaatgaatggaagcaatatcctcgaaatggggcta
attgtgcaaagcaactttaaagtatacctctataccaactcgacgctgaagataaatatt
ttaagtcatttgtgcgaactacaagcaaggacccccaacatggtcgtaggaattttaacc
aggaggagtgtcctaaatgcgtacaactcagatatcactgcaaatcagattatcaaattt
ttggaatcctatgctcacccaggtagaagcacttttaaaagctccatacctgtgaatgtg
atcacacaactgaagctgtgggagtcggagagacataggttaaccctcgacgatgccatc
gtctttaagtccttcgaaaaggaattcctcccacacctttaccagcaaatcgttgtctgg
gccaatagcaaaaattacctactgcattatacgccctggcccaaaaatgccaactccccg
gaattcgacgcatggatgaagtcggaaaagtacctctgctgcatctacgagtcgaagaat
gagatcatcgataagattaaggagattcgcgagaagctcatgaagaagcgccagggtgcg
tag
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