Plasmodium vivax: PVX_111600
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Entry
PVX_111600 CDS
T01073
Name
(RefSeq) pre-mRNA splicing factor, putative
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pvx
Plasmodium vivax
Pathway
pvx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVX_111600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvx03041
]
PVX_111600
Spliceosome [BR:
pvx03041
]
Common components
Common spliceosomal components
SR proteins
PVX_111600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
5471403
NCBI-ProteinID:
XP_001608544
UniProt:
A0A1G4H9M8
A5KE64
LinkDB
All DBs
Position
6:1027065..1030372
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AA seq
544 aa
AA seq
DB search
MSYKSSRYNRISSCIYVGNLPGNVVEDEVYDLFAKFGRIKYIDVKKPRAPGVPYSFAFVH
YFDSRDAEYAIDRRDGYKYDGVRLRVEYSGENKSYGKYRKKEEGAGPPVRTEHRIIISNL
PESCKWQHLKDVMRQCGDVGYANIERGRGVVEFISRDDMLYAIEKFDGSEFKVYDDVTNI
KVRRDRRASSYMKRHREDHYSPRHNKRRRYSEESGSASRNRSRSRKHNKYSNSPTKRNNK
YDSGSESEGDNKDKSKYDKSKGKTGGPQDKRSYSSDGKRSKSGSNNSSRSGDRNYKKKKS
KHDNSSDRSSEYGEKGSAKNNSRSKSGSRKRSLSEDDGSRSRKRSLSEGGGGSKDRKRSL
SLKRENSSSNEKKGKRKRSNSSERSNYRSNSREMNKEKEDKSNDERSESRKSYKSPSNNS
EKEKSNDEKKKPVAKRTKKTTNTARKTKNADEKGKKTNNDKTSKNEDYENVSNDGNKSDG
EKYVDKENNKEENSGTNKNEGTKKSAASEAKPKRGGGRRGRKKAPGEENAANTADENVNG
NASN
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaatcctccagatacaacagaatttcttcgtgcatatatgtggggaactta
ccaggaaatgtcgtagaggatgaggtctacgatttgtttgccaagtttggacgtataaaa
tatatcgatgtaaaaaaacccagagctccaggcgtaccttattcttttgcattcgttcat
tatttcgattccagagatgcagaatacgccatagatagaagagatggttataagtatgac
ggcgttcgtttgcgtgttgaatattcaggagaaaacaaaagctatggaaagtatagaaaa
aaagaagagggagctggcccccctgtaagaacggaacatcgaattattataagtaatttg
ccagaaagttgcaaatggcagcatttaaaagatgtcatgagacagtgtggtgatgtagga
tatgctaacattgagcgtggaagaggtgtagtggagtttattagccgtgacgatatgcta
tatgcaattgaaaaatttgatggctcagaatttaaagtttatgacgatgttacaaatatt
aaagttagaagagataggagagcttcttcatacatgaaaagacatagagaggatcattac
agtcccagacataacaagagacgcagatatagtgaagaatcaggatctgcctcaagaaat
agatctagatcaaggaaacacaacaaatatagcaactcacccacaaaaagaaataataaa
tacgactctggaagtgaaagcgaaggtgataataaagacaaaagcaaatatgataaaagc
aagggcaaaacaggcgggccccaagataaaagaagttacagctcagatggcaaaagaagc
aaaagtggatcgaataattcttctagaagtggtgatagaaattacaaaaagaaaaaaagt
aagcatgacaattcaagtgatagatcaagtgaatatggcgaaaagggaagtgcaaaaaat
aatagccgtagcaaaagtggaagtaggaaaagaagcttaagtgaagatgatggaagtagg
agtagaaaaagaagcttgagcgaaggtggtggtggaagcaaagataggaagaggagttta
agtctgaaaagagaaaatagctcgagtaatgaaaaaaaaggaaaaagaaaaagaagcaat
tcttctgaaagatcgaattatagaagcaattcgcgggaaatgaataaagaaaaagaagat
aaaagcaatgatgagagaagtgaatctagaaagagttataaatctccgagcaataactca
gaaaaggaaaagagcaacgatgaaaaaaagaaaccagttgccaaaagaacaaaaaaaact
acaaacactgctaggaaaacgaagaatgcagatgaaaaaggtaaaaagacaaacaatgat
aaaacaagcaaaaatgaggattatgaaaatgtgtccaatgatggaaataaaagcgatggg
gagaaatatgtagacaaggaaaataataaagaagaaaattctggtacaaataaaaatgaa
ggaaccaaaaaatcagcggcgtcagaggcaaagcctaaaagggggggaggaagaagagga
agaaagaaagctcccggagaagaaaatgcagccaacacagcagatgaaaatgtaaatggc
aatgccagtaactaa
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