Plasmodium vivax: PVX_114935
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Entry
PVX_114935 CDS
T01073
Name
(RefSeq) hypothetical protein, conserved
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
pvx
Plasmodium vivax
Pathway
pvx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVX_114935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvx03019
]
PVX_114935
Messenger RNA biogenesis [BR:
pvx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
PVX_114935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_S1
PIN_4
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
5475676
NCBI-ProteinID:
XP_001616377
UniProt:
A0A1G4GZM9
A5K2K0
LinkDB
All DBs
Position
11:complement(<499701..>502703)
Genome browser
AA seq
1000 aa
AA seq
DB search
MQRFKFLNRKNDQRVQKCFYKCSANHRITKIVREVYLRNDISCGVERCNVCENKNKKKYL
DAERNILILDINTIVKYIDFLYECNVDNILIPLTIYEHVRTFNKILHKKLHELCYETEDS
NPSSTKRYSVFANKFCKFTYVDENTDLATKQVQEIIKIVIWMKQHNARLKLIVVSNNNFL
KDDCLKNDISCFSLYEYVKGLRKGNKKKEALGAINLDTLKMYFEEDMLMEEQHSKEGGVE
NGQADSNEDTFPIAEAKRMFEPHLEKKEMIQRLRDNLIVKGIFQVICVNKMALVKITDTD
EVLIRGSERMNRALHNDVVAVQILEDGGGELSGQEEEDYFEEVISPEEEQHEGGKQQEGE
LHQGKTHEGGKQQEGELHQGKTHEGETPPKSNARKGKVYGKVVGIISRGRKEYGGVIKAY
EKEQNAHRKKILFFKAFNNKVPYIIVKSSMGEELKNKRVIVVIDKWDYNSKYPLGRCLSV
LGICDDIETETKLIYNEYNISTKEFSESAYKCLPPNDWAIPEEEYAKRRDFRNVITFSID
PPGCEDIDDALSVRMMEGQNVIEVGVHIADVSYFVKQNSALDLEASKRCTTVYLINQRVE
MLPKLLTTDLCSLVEGQDRLTYSCIFTFDANYQVVDINVCKCIIRSNKSFSYEQAQKLID
DGEDSSPTAEALRLLNNIAKHLKEKWLNEGALELRGNSEVLFEFESNDFSKTKNLKPYVS
YDTNKLIEAFMLLANRSVARIIYQGFKAASVLRRHPPPKNEHLKELNDYLESINIHDFKY
GTSKELSHSINNINLKEDKVLCNILKILITKCMNEAVFISGYSVHNNEMLRHYGLAADIY
TFFTSPIRRYADIMVHRVLNHIYGVENLDSKYLDVIYLNKQVALLNEKYRNARFAGRASV
EFFSYLYIKKVGNQITNAVITNLKKNGVQIFLPSYSVEGICYLKRKDGFVFDEKRKRFQR
IGENDEVLFSLSFYDNIQVHVQVDSSDIKCQSNFVFIKKL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcttcaaattcctaaaccggaaaaacgaccagcgcgtccaaaagtgcttctac
aagtgcagcgcgaaccaccgaatcacgaagatcgtgagggaggtgtatctgcgaaacgac
ataagctgcggagtagagagatgcaacgtgtgcgaaaataaaaacaaaaaaaagtacctg
gatgcagagaggaacattctcatcttagatataaacaccatagtaaaatacatagacttc
ctatacgagtgcaatgtagataacatattaatccccctgacgatttatgaacatgtgagg
acctttaataaaattcttcacaaaaagctacacgagctttgttacgagacggaagatagc
aaccccagcagtaccaagcggtacagcgtcttcgccaacaagttctgtaaattcacctac
gtggatgagaacacagatctggccaccaagcaagttcaagaaattataaaaatagtcatc
tggatgaagcaacataatgccaggctaaaactaatcgtcgtaagtaataataatttttta
aaagatgactgcctgaaaaatgatatatcctgttttagcctgtacgaatatgtgaagggg
ttaagaaaggggaacaaaaagaaggaggcacttggagccatcaacttggacactttaaaa
atgtattttgaagaagacatgctaatggaggagcagcatagcaaggagggaggggtggaa
aacggccaagcagattcgaacgaggatacgttccccatcgcagaggccaaacgaatgttc
gaaccccatttggagaaaaaggaaatgattcaaaggcttagggataacctcattgtgaag
ggcatttttcaagtcatatgcgttaataagatggccctagtgaaaatcacagacacggat
gaagttcttatacgggggtccgaacgtatgaacagggcgctacacaacgatgtggtggcg
gtgcagattttggaggatggcgggggggagctctccgggcaggaggaggaggactacttc
gaggaggtcatcagtccggaggaggagcagcacgaggggggaaagcagcaggagggagag
cttcatcaggggaagacgcacgaggggggaaagcagcaggagggagagcttcatcagggg
aagacgcatgagggggaaaccccccccaagagcaacgccaggaagggcaaagtgtacgga
aaggtagtcggaatcatcagcaggggaagaaaagaatacggaggagtgatcaaggcatat
gaaaaggagcaaaatgcacacagaaagaaaattttatttttcaaagcgttcaataacaag
gtgccatacatcatagtgaagagcagcatgggagaagagctaaagaacaaaagggtaatt
gtggtgattgataagtgggactacaattcgaagtaccccttggggaggtgcctatctgtg
ttaggcatatgtgatgacatcgagacggaaacgaaattgatctataacgagtataatata
tcgacgaaggagtttagcgaaagcgcctacaagtgtctaccccctaacgattgggcaatc
ccagaggaggaatatgccaagaggagagattttagaaatgtgataacgtttagcattgac
cccccagggtgtgaagacattgacgatgcgttatcggtgcgaatgatggaggggcaaaac
gttatagaggtaggggtgcacatagcagatgtgtcctactttgttaagcaaaacagtgca
ttagatttagaagcgtccaaacggtgcacaacggtttatctaataaaccaacgtgttgaa
atgctgccaaaattgctgaccacagatttgtgttccctagtagaaggtcaagacagactg
acctacagctgcatcttcacatttgatgcgaattaccaagttgtggatataaacgtgtgt
aagtgcatcatcagaagtaataagtccttttcgtatgaacaggcacagaagctgattgac
gatggggaggattcttcccccacggcggaggcgctacggttactcaacaacattgcgaag
cacttaaaggagaagtggctaaacgaaggggcactggagttgagaggcaattcggaagtc
ctattcgaatttgagtccaacgatttttctaagacgaaaaatttaaagccatatgtatcg
tacgacacgaataagctaattgaagcctttatgcttttggctaaccggtccgtggcaagg
ataatatatcaaggcttcaaagcagctagcgtgttgaggagacatcctccaccaaaaaat
gaacatttgaaagaattaaatgattacttagaatcaataaatattcacgattttaagtat
ggcacttctaaggagctatcccactccattaataatataaatctgaaggaggacaaggtg
ttgtgcaatattttaaaaattttgatcaccaagtgtatgaatgaagctgtgtttatctca
ggctatagtgtacacaataatgaaatgttgaggcactacggattggctgcagatatttac
actttttttacatcccctattaggagatacgcagatataatggtccatcgagttcttaat
catatttatggcgtcgaaaatttggacagcaaatacctggatgttatttatctgaacaag
caagttgctttactaaatgaaaagtatagaaacgccagatttgcgggacgggcgtcggtt
gaatttttctcgtacctttacattaaaaaagttgggaaccaaattaccaatgcagtgatt
accaatttgaagaaaaacggggtgcagatatttctaccgagctactccgtggagggcatt
tgctacttgaagaggaaggacggcttcgtcttcgatgagaagcgcaagcgctttcagagg
attggcgaaaatgatgaggtgctcttctccctcagcttctatgacaacatccaggtccac
gtccaggtggacagcagcgacatcaagtgtcagagtaactttgtttttataaagaagctc
tga
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