Plasmodium vivax: PVX_122565
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Entry
PVX_122565 CDS
T01073
Name
(RefSeq) transcription factor, putative
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pvx
Plasmodium vivax
Pathway
pvx03022
Basal transcription factors
pvx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVX_122565
09124 Replication and repair
03420 Nucleotide excision repair
PVX_122565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvx03021
]
PVX_122565
03400 DNA repair and recombination proteins [BR:
pvx03400
]
PVX_122565
Transcription machinery [BR:
pvx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PVX_122565
DNA repair and recombination proteins [BR:
pvx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PVX_122565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
Tfb4
VWA
Zn_Ribbon_1
VWA_3
Motif
Other DBs
NCBI-GeneID:
5476385
NCBI-ProteinID:
XP_001617076
UniProt:
A0A1G4H4F1
A5JZD8
LinkDB
All DBs
Position
14:686636..688537
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AA seq
401 aa
AA seq
DB search
MHKSQNVENKTVLVEEVVRDFDKNEVFEEITAKFTWEQDVERSWNLLVENNGILQHVSQE
NLEEKGKQKYKKNQVCALRKGIFRHIIILFDMSSSMKERDFKPDRINVVLECVENFLTHF
FFKNPVGHVGVVALKNSSAKLIQPLTSNMEDITNALLKERSMGLQGSPSLQQGLEIAHDL
LIDIPLYGTKEILIMYGSIRTCDKKNILNILNLIVKNNMHVNCVSIAPEMHILKHICEQT
NGSYKICMTKNSLMNEMNNITETPLWMMGMEPQLIHICFPIKKKISTQIMCSCHNNLNTD
TYICNFCNSYTCKIPSKCKVCGMHLISMHDLSHITNNLQGSPLFLEIKNEEKGPSVCVSC
NKRLYDKVSQCSKCGNLFCLACDLYIHEDLNQCPFCLIQDT
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagtcccaaaacgtcgaaaataagaccgtcctagtcgaagaggttgtgcgcgat
tttgataaaaatgaagttttcgaggagataacggctaagtttacctgggagcaagacgtc
gagcgatcatggaacctgctggtggaaaacaacggcattctgcagcacgtgagtcaggaa
aacttggaagaaaaaggcaaacagaaatataagaagaatcaggtctgcgctttgaggaaa
ggaatattcaggcacatcatcatcctgttcgatatgtccagcagcatgaaggagagggac
ttcaagcccgaccggataaacgtcgtcctcgagtgtgtggagaacttcctgacgcacttc
ttcttcaagaaccccgtggggcacgtcggggtggtggccctgaagaacagctccgcgaaa
ttaatccagccgctaacctccaacatggaggacatcaccaacgcgctgctaaaggagagg
agcatgggtctgcagggatctccctccctacagcagggactcgaaattgcccacgacttg
ttgatagatatccccctctacgggacgaaagaaattctaatcatgtatggctccataaga
acatgcgataaaaaaaacattctaaacattctaaacctaatagtaaaaaataatatgcat
gtaaactgcgtgtcgatagccccagaaatgcatatcctaaagcacatatgtgagcagaca
aatggatcctacaaaatctgtatgacgaaaaattccctgatgaatgaaatgaataacatc
acggagacccccctgtggatgatgggaatggagccgcaactcattcatatatgttttccc
ataaagaaaaaaatcagcacccaaatcatgtgctcctgtcataacaacttaaatacagat
acttatatttgcaacttttgcaatagctacacgtgcaagataccatccaaatgtaaagtc
tgtgggatgcacctgatttcgatgcacgacttgtctcatattacgaataaccttcagggg
tctccactttttctagaaattaaaaatgaggagaaggggcccagcgtgtgcgtctcctgc
aacaagcgcctctacgataaggtctctcagtgctccaagtgcgggaacctcttctgcctc
gcctgcgacttgtacattcacgaagatctcaaccagtgccccttctgcctgatccaggac
acgtga
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