KEGG   Pistacia vera (pistachio): 116105174
Entry
116105174         CDS       T07386                                 
Name
(RefSeq) cullin-4 isoform X1
  KO
K10609  cullin 4
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03420  Nucleotide excision repair
pvy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116105174
  09124 Replication and repair
   03420 Nucleotide excision repair
    116105174
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvy04121]
    116105174
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116105174
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvy04147]
    116105174
Ubiquitin system [BR:pvy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     116105174
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      116105174
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      116105174
Exosome [BR:pvy04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116105174
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 116105174
NCBI-ProteinID: XP_031247459
LinkDB
Position
Unknown
AA seq 810 aa
MSLPNKRTISNTSNTNHTSSMKKAKSQTVACSVDSAKNGLHHDFNNTNNPDNDVVFDPSS
LSLDEDLKTDDSRAPAAANLGRKKAQPPQPAKKLVIKLVKGKPTLPSNFEEDTWAKLKSA
IKAIFLKQPDSCDLEKLYQAVNDLCLHKMGGNLYQRIEKECEAHISAALQSLVGQSPDLV
VFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVRSLWDMGLQLFRKYLSSYSEVE
HKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALGIYTESFEKPFLECTSEFYAAEGMK
YMQQSDVPDYLKHVEIRLHEEHERCVLYLDVSTRKPLIATAERQLLERHISAILDKGFTM
LMDGHRTEDLQRMYVLFLRVNALESLRQALASYIRRTGHGIVMDEEKDKDMVSSLLEFKA
SLDTIWEESFSKNEAFCNTIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELE
GTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNK
LEGMFKDIELSKEINESFKQSSQARTKLPSGIEMSVHVLTTGYWPTYPPMDVRLPHELNV
YQDIFKEFYLSKYSGRRLMWQNSLGHCVLKAEFPKGKKELAVSLFQTVVLMLFNDAQKLS
FQDIRDSTGIEEKELRRTLQSLACGKVRVLQKLPKGREVEDDDSFVFNEGFTAPLYRIKV
NAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKVLSHTLLITELFQQLKFPIKP
ADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2433 nt   +upstreamnt  +downstreamnt
atgtctctccccaacaaacgcacaatcagcaacacctccaacactaatcacacctcctcc
atgaagaaggccaagtctcagaccgtcgcctgctccgtcgactccgccaagaacggtctc
caccacgactttaataataccaataaccccgacaacgatgtcgttttcgacccctcttct
ctgtccctcgatgaggatcttaaaaccgatgactctcgtgcccctgccgccgccaatttg
ggacgcaagaaagcccagccgcctcagcctgctaagaagctcgtcatcaagcttgttaaa
ggtaaaccaacactgccttcaaattttgaggaggatacatgggcaaagctgaagtcagct
ataaaagctatattcttgaagcaaccagattcctgcgacttagagaagttatatcaggct
gtcaatgatctttgcctgcacaagatgggaggaaatctttatcaacggattgaaaaggag
tgtgaagcacatatatctgcagcacttcaatcattggtcggtcaaagcccggatttggtg
gttttcttatcacttgttgagagatgctggcaggatctttgtgatcagatgttgatgatt
cgtggtatagctttgtatctagatagaacatatgtgaaacaaacacccaatgttcgctcg
ttgtgggacatgggcttgcagcttttccggaaatatctttcttcatactcagaagtcgag
cataaaactgtcactggccttttgagaatgattgagagagaaagattaggtgaagctgtt
gataggactcttcttaatcatcttttgaagatgtttactgctttaggaatttacacagaa
agctttgagaagccatttcttgagtgtacatctgaattttatgctgcagaaggtatgaaa
tacatgcagcaatcagatgttccagattatttgaagcatgtggagataaggttgcatgaa
gagcacgaaagatgtgtactttacttggacgtgagtacaagaaagccacttatagcaact
gctgaaagacaacttcttgaacgccacatatctgcaattcttgacaaggggttcacgatg
ctgatggatgggcatcgtactgaagaccttcagaggatgtatgtgctgtttttgagggtg
aatgcccttgaatcgttaaggcaggctcttgcctcatatattcgaagaactgggcatggc
attgttatggatgaagaaaaagataaagatatggtttcctccctcttagaatttaaggcg
tcccttgacacaatatgggaagaaagcttttctaagaatgaagcattttgcaataccata
aaggatgcttttgagcatctaattaatttgcgtcagaatcggcctgctgagttgattgca
aagtttctggatgagaagcttcgtgcggggaacaagggtacttctgaagaggaactagag
ggtacacttgataaagttttagttttattcaggtttatccagggtaaggatgtgtttgaa
gcattctataagaaggatcttgcaaaaaggttactattggggaagagtgcttctattgat
gccgagaaatctatgatttctaagctgaagacagaatgtggcagccaatttacaaacaaa
cttgaaggaatgttcaaggatattgaattatcaaaggagatcaatgagtccttcaaacag
tcgtcccaagcccggacaaaactcccatcggggatcgagatgagtgttcatgtcttaaca
acagggtattggcccacatatcctcccatggatgttaggctacctcatgaattgaatgtt
tatcaggacatttttaaggagttctacttaagcaagtacagtggaaggcgcttaatgtgg
caaaattcattaggtcactgtgtgttaaaggcggagttcccgaaaggtaaaaaagagctg
gcagtttccctattccagacagtagttttgatgctttttaatgacgcccaaaagcttagc
tttcaagatattagggattcgacaggcatagaggagaaggaattaagaaggactctgcag
tcccttgcatgtggtaaagttcgtgtcctgcaaaagttgccaaaagggagggaagtggag
gatgatgattcatttgtgttcaatgaaggatttactgcccctctttatcgtattaaggta
aatgcaatccagatgaaggaaacagtggaggagaacacaagcactaccgagagagtattc
caggaccgtcaatatcaggttgatgctgcaattgtgcgaataatgaagacaaggaaagtg
ctaagtcacacacttctgataaccgagctcttccaacagctcaaatttcccataaagcca
gctgatctgaagaaaaggattgaaagcctgattgacagggagtacctggagcgtgacaag
aacaacccgcagatatacaattacttggcctaa

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