Pistacia vera (pistachio): 116105303
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Entry
116105303 CDS
T07386
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116105303
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116105303
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF702
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
116105303
NCBI-ProteinID:
XP_031247603
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MMVNSSNKQSPLPTVATTTTSPPPSSTAKTWPPPPPPPFHHHPTFPLDHPSSAMLGLHNI
LLLAPSSSSCHHHHHHIHEQPPPPFSASLTEPNFWSSFKKRQDSTTREDHKAHVAHDDQD
DNDNEEEDDDHENQNFMKVCKDCGNRAKKECSFSRCRICCKSRGYDCATHVRSTWIPSSK
RRDKKFTMDGGSSASASSSSGAKRSRLPVPALSSDNLTTNSSDFHLPTLCFTGSVPQDAS
FKKALPGKVKAPAVFRCISVTSINDGEDNEIGYVGTVNISGHVFKGFLYDQGINDEKNLF
PCISSKMEANSSAKNRDSSSSSPIVDPSTTFAASAT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgaattcaagtaataagcaatccccactgccaactgtggccaccacaactact
tcccctcctccttcctccaccgccaaaacatggcctccgccacctcctcctcccttccac
caccaccccacattccctcttgatcacccctcttctgccatgctcggcctccacaacatc
ctcctcctcgccccctcctcctcctcctgccaccaccaccaccaccacattcatgaacaa
ccaccaccacccttctccgcctcccttaccgagcccaacttctggagctccttcaagaaa
cgccaagattccaccactcgtgaagaccacaaagctcatgttgctcatgatgatcaagat
gataatgataatgaagaagaagatgatgatcatgaaaatcaaaacttcatgaaagtttgc
aaagattgcggcaaccgagccaagaaggagtgcagttttagccggtgtagaatttgctgc
aagagccgtggttatgattgtgctactcacgtgaggagcacgtggatcccctcttcaaaa
cgcagagacaagaaattcaccatggacggtggctcttcagcttctgcttcttcttcttct
ggtgctaaaaggtcaagacttcctgttcccgcgttgtcttctgacaatctcaccaccaac
tcttctgattttcatctccccactctttgtttcactggctctgtccctcaagatgcgagt
ttcaagaaagcattaccggggaaagtgaaggcgccggcagttttcaggtgtataagtgtg
acttccattaatgatggggaagataatgagattggatatgtgggtacagtgaacatcagc
ggccatgttttcaaggggtttctttatgaccaaggaattaatgatgagaagaatttgttc
ccttgcatttcatcaaaaatggaagctaattccagtgccaaaaatagggactcctcttct
tcttctccaattgttgatccttccactacttttgcagcctctgccacttga
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