Pistacia vera (pistachio): 116105421
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Entry
116105421 CDS
T07386
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116105421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvy03021
]
116105421
03036 Chromosome and associated proteins [BR:
pvy03036
]
116105421
Transcription machinery [BR:
pvy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116105421
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116105421
PBAF complex
116105421
GBAF(ncBAF) complex
116105421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116105421
NCBI-ProteinID:
XP_031247707
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDISQHDPNSKPNRSGGPDVELYTIPSNSSWFRWDDIHETERIALKEFFDGSSISRTPKI
YKEYRDFMINKYREEPYRRLTFTQVRKSLVGDVSLLHKVFNCLDKWGLINFGAPASDNRD
NLEDIKLQDQVRVEEGAPNGVRVGAMPNSLRPLSPPQSAGEGRVLDGENGFKLPLLASYS
DVFGDLVKLKGLKCMSCGEKCDSGCYEYCKQGRFIICVKCFKNGNYGENKSMDDFKFNDG
NGKNVTHGSTWTEAEILLLLESVMKHGDDWELVAQNVKTKSKLDCISKLIELPFGEFIMG
PGRGRGGPDGSTGSSNIATHGLMPSSEHHDTKVEDQVHEQMDETEQNGDAASQEPPAKRI
RIASLSDAGGSLIKQVALISTMGGPHITAAAAEAAITALCDESSCPREIFDDNEEAYQVG
ALETKETSSQSGSQETCTENNDIPLTLRIRAATATALGVAASNAKLLADQEDREIEHLVA
TMIETQLKKLHCKIKHFEDLELIMEKEYAEMLELKECLVAERIDVLQRALSAGVSKWRDH
TYIKSQTEAITVSLSGSLLWGADAIGLELGSWNILHH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggatatctcacaacatgacccgaactctaaaccgaatcgttccggcggacccgacgtc
gaactctataccattccaagcaactccagttggtttaggtgggatgacattcacgaaaca
gagcgtatcgctctaaaagagttctttgatgggagctcaatttcaagaactcctaaaata
tacaaagaataccgggacttcatgataaataagtacagagaagagccttacagaaggttg
acattcactcaagttagaaagtcacttgtgggtgacgttagtttgctccataaagtcttc
aattgtttggataagtggggtttgataaactttggtgcacctgcgagtgacaatagagat
aacttggaggacattaaacttcaggatcaagttagggttgaggaaggagccccgaatggg
gttcgtgtgggtgcaatgccaaattctttgagaccactgtcgcctccgcagtctgcaggg
gaaggtagagtgctggatggtgaaaacgggtttaaattgccccttctggcgtcgtattca
gatgtttttggtgatttggtgaagctgaagggtttgaagtgtatgagctgcggagagaaa
tgtgattccggatgctatgagtattgcaagcagggtcgcttcatcatttgtgtaaaatgt
ttcaaaaatggaaattatggggagaacaagtccatggatgattttaagtttaatgatggc
aatggaaaaaatgttactcatggatctacctggactgaggctgaaatcctacttctttta
gaatctgttatgaagcatggggatgactgggagcttgttgctcaaaatgttaaaactaag
agtaaactcgattgtatttcaaagctcattgagctgccttttggggagtttataatgggt
cctggccgtggaaggggtggtcctgatggctccactggtagctcgaatattgctacacat
ggactgatgccttcatctgagcatcacgacactaaagttgaggatcaggttcatgagcag
atggatgagactgagcaaaatggagatgctgcaagccaggaacctcctgcaaagagaata
cgaattgcttccctttcggatgctggtggttcattgataaaacaggttgctctcatctca
accatggggggcccacatataactgctgctgcagccgaggctgcaatcacggcactttgt
gatgaaagctcatgtccaagggagatatttgatgacaatgaggaggcatatcaggtcggt
gctttagagacaaaggaaacatcctcccagtcaggaagtcaagagacatgcacagaaaat
aacgacatacctctgactttacgtattagagcagcgacagcaactgctcttggggtagct
gcttctaatgccaaattattagctgatcaggaagacagggaaattgaacatttagtggcc
accatgattgagacacagttaaagaaattgcactgcaaaatcaagcattttgaagatctg
gagctgataatggagaaggaatatgctgaaatgttggaactgaaagaatgtcttgtagca
gagcggattgacgtcttgcaaagggctttgagtgctggtgtatctaaatggagagatcat
acttatattaaatcgcaaactgaagcaattactgtctctctctctggttctctgttatgg
ggtgctgatgcaattgggttggaattagggtcatggaacattttgcaccattag
DBGET
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