Pistacia vera (pistachio): 116105601
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Entry
116105601 CDS
T07386
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116105601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116105601
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
116105601
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
DEAD
Astrovir_pp_1
Motif
Other DBs
NCBI-GeneID:
116105601
NCBI-ProteinID:
XP_031247872
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MPKKRRSNLYQSKHPFDVYPFEAFFHDSWQPVEFIRIEDGIVTMHLTDNQTLVEEKRPFS
NLRLKSRRATLSDCTCFLRPGVDVCLLSATENAENSEEENKDPVWLDAKISSIERKPHGD
QCLCQFYVKLYVNQGPLGSERGTLSKESKLVGIDQITILQKLGKDACEDQHYRWDFSEDC
SLLQRSKLLLGKFSSDLSWLLVASVLKQTPFDIGSVQNKIVYQVLDGDEENSAPNSDKHL
YAINFNVDGGISTSHVVQFIQTDTKPVSPDCSVQEAGPVPLCDVMNLRRSKRRNVQPERF
FGCDIPPDSDIGWVRQLPYKPDKWKEEDLYLPLPCLVWGHSNCSEENVESDTRNLPKKKS
RNKHKEVKTSMASQKEHNTELAIVPVPTESDPLAFYQDDLPAKNPENHSGEIDETPLKYY
LKGPRSVQRRDTSELEDTEFERWWGEINPNKKVLSKNISKVEDMGFESRTWGKLSNKKVQ
TNRFRPRSSKNDACCERKVYKKTTLSAGAYSRVINSYMKNIESTMTNEEPDIIDQWNGFK
ANSLEQMMEMEQSEMEQTSSEDDGEISENEILWKEMELSMASTYILEDNEGSKSGEPTET
LEKSSEGCQHKYRLDEEVGICCIKCGFVRTEIKYVAPPFMQHRIWETDNKVEDQEYSKHK
PVEDEGLNIFCNQASSDFSLSEENDNVWALIPELKKKLHFHQKKAFEFLWRNIAGSVEPA
LMQPASKKTGGCVISHSPGAGKTLLIIAFLVSYLKLFPGKRPLVLAPKTTLYTWYKEFNK
WKIPIPVHLIHGRRTYRVFKPKRVKSFRGVPAPTLDVMHVLDCLEKIQKWHAQPSVLVMG
YTSFLTLMREDANFAHRKYMAKVLRESPGILILDEGHNPRSTKSRLRKVLMKVETDLRIL
LSGTLFQNNFCEYFNTLCLARPKFINEVLRELDPKFKRRKNKKKALHLLESRARKFFIDT
IARKIDSDNGEERMQGLNMLKNITSGFIDVYEGVGSEELPGLQIYTLMMNPTDVQRNILE
QLQDIMKDYNGYPLELELLITLASIHPWLVKTSNCVNKFFTPEALMDLEKYKHDFRKGSK
VMFVLNLVYRIVKQEKVLIFCHNIAPINLFSELFQKVFRWQKGKEILVLTGDLELFERGR
IMDKFEEPGGPSRVLIASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQK
VVYVYQLLASETLEEDKYRRTTWKEWVSCMIFSEEFVEDPSLWQIEKIEDDILREIVAED
KLKSFRMIMKNEKASKGLIRT
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagaggaggagcaatttatatcaatccaagcatccatttgatgtttatcct
tttgaggcattttttcatgactcatggcaacctgtggagttcataagaatcgaggatggg
attgtcaccatgcatctcacagataaccaaactctggttgaggagaaacgtccattctca
aatcttcgactaaaatcaaggagagcaactttatctgactgcacctgctttttgaggcct
ggagttgatgtatgtctgctttcagccactgaaaatgcagagaattcagaggaagaaaat
aaagatcccgtgtggcttgatgctaaaataagttccatcgagagaaagcctcacggagat
caatgcttatgccagttttatgttaaattatatgtcaaccaaggtcctcttggttcagag
aggggaactctcagtaaagagagtaaactagtaggaattgatcaaataaccatcctccaa
aagcttggaaaagatgcttgtgaagatcaacactaccggtgggatttctctgaggactgc
tctttgttgcaaagatctaagctgctgctggggaaattttcatctgatctttcatggtta
cttgttgcatcagttttgaagcagactccgtttgatattggatctgtgcaaaacaaaatc
gtctatcaagttttggatggtgatgaagaaaactctgcaccaaactcagataaacatcta
tatgctataaatttcaatgttgacggtggcatttcaacatctcatgtggttcagtttatt
caaactgatactaaaccggtcagtcctgattgtagtgtgcaagaagctggaccagtgcca
ctttgtgatgttatgaacctgcggcgatccaagcgtcgaaatgtacaacctgagcgattt
tttggctgtgatattcctccagactcagacattggctgggttcgccaattgccatataag
cctgacaaatggaaagaagaagatttgtacttaccattaccatgcctggtatgggggcat
tcaaattgctcagaagagaatgtggagagtgacacaagaaatcttcctaaaaagaagagc
aggaataaacataaggaggtgaaaaccagtatggccagtcaaaaagaacataacactgaa
cttgccattgttcctgtgcctactgaaagtgatccattagccttttatcaggatgatctc
cctgccaaaaatcctgaaaatcattcaggagagattgatgaaactcctctcaagtattat
ttgaaaggtcctcgttcagtgcagaggagggatacatctgagttagaagatactgagttt
gaaagatggtggggagaaataaaccccaacaaaaaagtgctaagtaaaaatatctccaag
gtagaagatatgggatttgaaagtaggacatggggaaaactgtccaacaagaaagtccaa
actaacagatttcgtccaagaagttcaaaaaatgatgcatgttgtgaaagaaaggtgtat
aagaaaacaaccttaagtgcaggagcatacagtagagtaataaattcatatatgaagaat
attgagtccacaatgacaaatgaagaaccggatattattgaccagtggaatggatttaag
gcaaactccctagagcaaatgatggaaatggaacaatcggaaatggagcaaacctcaagc
gaagatgatggagaaatttcagaaaatgaaattttatggaaagaaatggaattatctatg
gcatcaacttatatccttgaggacaatgagggttcaaaatctggagagccaactgagact
ctggaaaaatcaagtgaaggttgccaacacaaatacagattagatgaagaagttggaatt
tgttgtattaaatgtggtttcgtgcgcacggaaataaaatatgttgcaccaccctttatg
caacacagaatctgggaaactgacaataaggtggaggatcaagaatattcaaagcataag
cctgttgaagatgagggcctgaatattttctgcaaccaagcttcctctgacttctcctta
tcagaagagaatgacaatgtgtgggccttaattcccgaacttaagaagaaattgcatttt
catcagaaaaaggcttttgaatttctatggagaaatattgctgggtctgtggagccggca
cttatgcaaccagcatctaagaaaactggcggttgtgttatttctcattctcctggcgct
ggaaaaactttgctcattattgcattccttgttagctacttgaagttattcccaggaaaa
cgacctttggtccttgccccaaagacaactctttatacctggtacaaagaatttaataag
tggaaaattcccataccagttcatctaatccatggccgtaggacctatagagtcttcaag
ccaaaaagggtaaagtcattccgaggagttccagcccctactttagatgttatgcatgtt
ctggattgcttggagaagatacagaagtggcatgcacagcccagcgttcttgtcatgggt
tacacttcgtttctaacactaatgcgggaagatgcaaactttgcacacagaaaatatatg
gctaaagtgctgcgggagagtccagggatcctgatactagacgaagggcacaaccctaga
agcactaagtcaagattgaggaaggttctgatgaaagttgaaacagacctgagaatattg
ctttcaggtacattatttcagaacaacttctgtgagtatttcaatacactctgcttggcc
cgaccaaagtttatcaatgaagtgctgagggaactagacccaaaattcaaaaggagaaaa
aataagaagaaggccctccatttattagaatctcgcgcaagaaaattcttcatagatacc
attgcaagaaagattgattcagacaacggtgaagaaaggatgcaaggtttaaatatgttg
aaaaatatcacaagtggatttatcgatgtgtatgaaggtgtaggttctgaggagctccct
ggtttacaaatttacaccttaatgatgaatccaacggatgtacaacgtaacattttagag
caacttcaggatattatgaaggattacaatgggtatcctcttgagttggagcttttgata
acccttgcatcaatacatccttggttggtaaaaacttcaaattgtgttaacaaatttttt
actcccgaagcactaatggatcttgaaaagtacaaacatgattttagaaaagggtccaaa
gtgatgtttgttctaaatcttgtgtatcgaattgtcaagcaagagaaggttctgattttt
tgccacaatattgcacctatcaatttgttttcagaactgttccagaaagtctttcgatgg
cagaagggtaaagaaattttggttctcacaggggacctagagctgtttgaacggggaaga
ataatggataagtttgaggaacccggtgggccttcaagggtattgattgcttcaattaca
gcgtgtgctgagggtattagtttgacagcagcttcgcgggtgattatgttagattcagag
tggaatccttccaagacaaagcaggccattgcacgtgcttttcgacctggtcaacagaag
gttgtttatgtgtatcagctcttggcatctgaaacactcgaagaagacaagtatcgcagg
acaacatggaaggaatgggtatcctgtatgattttcagtgaggaatttgtagaggaccct
tctctctggcaaatagaaaaaattgaagatgatatattgagagagattgtggcagaagac
aagttgaagtctttccgtatgataatgaaaaatgagaaggcttcaaaaggattgatcaga
acctag
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integrated database retrieval system
