KEGG   Pistacia vera (pistachio): 116106033
Entry
116106033         CDS       T07386                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
pvy  Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvy04812]
    116106033
Cytoskeleton proteins [BR:pvy04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     116106033
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_SPT8 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_EIPR1 eIF2A Beta-prop_IFT122_1st Beta-prop_IFT140_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_IP5PC_F WD_LRWD1 Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 116106033
NCBI-ProteinID: XP_031248254
LinkDB
Position
Unknown
AA seq 1038 aa
MAKRGYKLQEFVAHSANVNCLSIGKKACRLLITGGDDHNVNLWAIGKPTSLMSLCGHTSP
VESLAFDSAEVLVLAGASAGVIKLWDLEEAKMVRTLAGHRSNCSSVQFHPFGEFFASGSM
DTNLRIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGQIRSIDFHPLEFLLATGSADRTVKFWDLETFELIGSSRPETTGVRSITFHPDGRT
LFCGLDDSLKVYSWEPVLCHDAVDMGWSTLGDLCINDGKLLGCSFYQNSVGVWVADVSHI
EPYGPGVPEQNDCTEKKINSPGTHSSEKVGSGIRSTSSLRCRSPDYDTKGIKTIYVDSTG
GKPVTSQKVGSLDSPKIVLPVDTKEITDLKTEKQNPAIDSLAKSNAQALIKSFVVPSIVP
REGPAGKDSSNSGRESITFCKTKPGMLLRPAHVRRPSVSKIEAEKASTPVESGSFRSMKG
DMDSAKDPNFQTQLVLSDGGRKSFENDSDIKNCTEKIQKAVSLQGPLNQENRDESLNHSK
ETHAVKYVNGVAVVRGRTRSLVERFEKRKGFNTNDNQAINSNPQRTVSSNEDQSTIITPS
TRLSSNEDQATKVTPQMRIDSNADQTTNTITHVKFQNNEGQANNTTSPVRFKNSEDQATS
TTPPVRFTNSEDRTTNAAPPARLKSSEDRTTNTTPPGRFMDSEDRVTNATPPGRFMNSED
RTTNTTPPGRFKNSEDQVARTTPPGRFKNSEVQVAGTTPPARFKKSENQATNTTPPVRFK
KSEDQPTKAIPRMRFKNNVDQPTNTTPYMRFKNNDEKATNAAPHVRYKNNGEQATILSSH
RMVEADERPTILSREPQIPGRDTTSANDGEVIENLMQTHDVFISTLRSRLTKLQVVRHFW
ERNDVKGAIGAMMKLPDHSVQADTISILMEKMETLNLDLFLCLLPVLVGLLDSKMERHAS
ISLEMLLKLVAVFGPMIHSTVSAPPAVGVDLHLEQRRECCKQCFVHLQKVQKILPDLVRR
GGLLAKCASELNLILQES
NT seq 3117 nt   +upstreamnt  +downstreamnt
atggccaagcgtggatataagctgcaggaatttgtggcacattcagcgaacgtgaattgt
ctaagtatcgggaagaaagcatgtcggcttcttataactggtggggatgatcacaatgtc
aatctttgggcgattgggaaacccacctctttaatgagcctgtgtggtcatacaagtcca
gttgaatctttagcttttgattcagccgaagtgttggtgcttgctggagcttctgctggt
gtgataaagctgtgggatttggaagaagcaaagatggtgcgcactcttgctggacataga
tccaattgctcttctgttcaatttcatccatttggggaattctttgcttctgggtccatg
gacacaaatttaaggatttgggatatcaggaagaaaggatgtattcacacatacaagggt
catactcgaggcattagtactatcagattcactcctgatggtcgctgggtagtgtctggt
ggatttgataatgtagtaaaggtgtgggatcttactgctggaaaactcttgcatgacttt
aagtttcatgaagggcaaattagatctatagacttccatcctcttgagtttctcctggca
acaggttcagcagacagaactgtgaaattctgggatttggaaacctttgaactgattgga
tcttccagacctgagactactggagttcgctcaattacctttcatcctgatgggaggacc
ctgttttgtggtttggatgatagtttgaaggtctattcatgggagccagttttatgtcac
gatgctgttgatatgggatggtcaacacttggtgatctctgcattaatgatggaaagctt
ttgggatgttccttctatcaaaattctgttggagtttgggtagcagatgtttcgcatatt
gagccatatggacctggtgtacctgagcaaaatgactgcacagagaagaaaattaattcc
ccaggaactcattcttcggagaaagtagggagtggcattagatccacttccagtttgcgc
tgcaggtctcctgattatgacacaaaggggataaagaccatatatgtggactctactggt
ggaaaacctgtaacttctcagaaagtggggtctttggactctccaaaaattgtactccct
gtggataccaaggaaatcactgatctcaaaacagagaagcagaatcctgcaatagattcg
ctggcaaaatctaatgcgcaagcacttattaaatcttttgttgttcctagtattgtacct
cgtgagggtcctgctgggaaagactcttccaattctggcagagaatctattaccttttgt
aagacaaaacctggtatgctgctccggccagctcatgtacgaaggccatcagttagcaag
attgaagctgaaaaggcgtctacacctgttgaatctggaagtttcagaagcatgaagggt
gatatggacagtgcaaaggatccaaacttccaaactcagcttgtattatcagatggaggt
agaaaatcctttgaaaatgactctgatatcaagaactgtacagagaagattcaaaaagct
gtctctctgcaaggacctttgaatcaagaaaaccgtgatgagtcccttaatcacagcaaa
gaaactcacgctgttaaatatgtcaatggagttgcagttgtacggggaaggacacgctct
ctggtagagaggtttgaaaaaagaaagggatttaatactaatgacaatcaagcaattaat
agcaatcctcagaggacagttagtagcaatgaagaccaatcaacaattatcacacctagc
acgagactcagtagcaatgaagatcaagcaactaaggttacccctcaaatgagaattgat
agcaatgcagatcaaacaactaacactatcactcatgtgaaatttcaaaacaatgaaggt
caagcaaataatactacctctcctgtgagatttaagaacagtgaagatcaagccactagt
actacccctccagtgagatttacgaacagtgaagatcgaacgactaatgctgcccctcca
gcgagattgaagagcagtgaagatcgaacaactaatactacccctcctgggagatttatg
gacagtgaagatcgagtgactaatgctacccctcctgggagatttatgaacagtgaagat
cgaacgactaatactactcctcctgggagatttaagaacagtgaagatcaagtggctcgt
actaccccacctgggagatttaagaacagtgaagttcaagtggctggtactaccccccct
gcgagattcaagaaaagtgaaaatcaagcaactaatactacccctcctgtgagatttaag
aaaagtgaagatcaaccaactaaggctatccctcgtatgagatttaagaacaatgtagat
caaccaactaatacaactccttacatgagatttaagaacaatgacgagaaggcaactaat
gctgctcctcatgtgagatacaagaacaatggagagcaagcaactattctaagctctcac
aggatggttgaagctgacgaaagacccaccattctgagtcgagaaccgcaaattccagga
agggatacaacctctgcaaatgatggggaagttattgaaaatttgatgcaaactcatgat
gtattcataagtactcttcggtctcgcttgaccaaattacaggtggttcgacatttttgg
gaaagaaatgacgttaaaggtgctattggtgccatgatgaagctgccagatcattctgtg
caagctgatactatcagtatcctgatggagaaaatggagactctcaacttagatttattt
ttgtgcttgcttcctgtgcttgtgggtttactggacagcaagatggaaaggcatgcaagc
atctcattggagatgcttctgaagcttgtagcagtatttggtccaatgatacactcaacc
gtttcagcacctcccgctgtaggtgttgatcttcacttagagcaaaggcgagaatgctgc
aagcaatgttttgtacatcttcagaaggtccagaaaattcttccagatcttgtaaggagg
ggtggtttgctggcaaaatgtgcttcagaattgaatttaattcttcaagaatcatag

DBGET integrated database retrieval system