Pistacia vera (pistachio): 116106359
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Entry
116106359 CDS
T07386
Name
(RefSeq) small RNA degrading nuclease 5
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
116106359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116106359
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
RNases
116106359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
MCM4_WHD
Motif
Other DBs
NCBI-GeneID:
116106359
NCBI-ProteinID:
XP_031248575
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MLSPKQKSEAEGEASEQDSSNDGRAGFFNIYGPQAKSEVVFKMPEANSTLNLQDVQGLVT
WVLAEGFMPSWVFIKNKPLIPKVVMLYLPGLDASLYLSQSKLLTGFKEFCGNPRALLALS
CVADSMQTIDSLLTCKLKRKRNELDSMKKSTQTSEQVTDNPSSVELLKDLPFPITYYTLM
AKELEENGYCLNQPGFLSTTPAPLGSSPYEILALDCEMCVTNEGFELTRITLVDMKGQVV
LDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLKDIQEEFLKLVYKETILVGHSLENDLL
ALKISHGSVIDTAVLYKHPRGGSFKTALRVLAKRFLSREIQQSGTGHDSIEDARATMELA
LLKIRNGPDFGSPPSFMRRKLLTVLSECGKTSSLIDDVSVVKRYASESSHAMPVSSDDEA
LLKARKEVKNDRVQFVWTQFSELYSYFKKQVEDEANLNGKLAEMISLVTCDKKPANTKDI
KSGVSSELKEILTRTDARVRSLCAALPTNTMLIICSGHGDTAIVQRVRKMLREQSETSLC
REKIVKVLEELQAQAEVALCFVGVKH
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctccaaagcaaaagagtgaagctgaaggtgaagcttcagagcaagatagttca
aacgacggccgtgccggtttcttcaatatatatggacctcaagcgaaatcagaagttgtt
ttcaagatgcctgaagctaattctaccctgaacttgcaagacgttcaaggccttgtaact
tgggttcttgctgaaggattcatgccctcctgggtattcattaagaacaaaccgttgatt
ccaaaagtagtcatgctttacctgccgggcctggatgcttctttgtacttatcacagtcc
aaactacttactggttttaaagaattctgtggcaatccgagggcacttttagcccttagt
tgtgtagcagatagtatgcagacaatagactcactgctaacatgcaagttgaaaagaaag
agaaatgagcttgattcaatgaagaaatctacccagacatcagaacaagttacggataat
ccatcttctgtggaactcttgaaagatctaccattccccattacatattatacactgatg
gcaaaagaattggaagagaatggatattgtctcaatcaaccaggctttctatctactact
cctgctcctttgggatcttctccctacgaaatattggcgcttgactgtgagatgtgtgtc
acaaatgagggttttgagctcacaagaataacactagtggatatgaaaggccaggttgtt
ttagacaaattggttaaaccttcaaatgccattgtggattacaacaccaggtttagtgga
attacatgcgagatgttgagtggagtaactacaagtcttaaagatatccaggaagaattt
ctaaagctggtttacaaagagaccattctagttgggcattccttggagaatgacttatta
gctttgaagatttcccatggttcggtgattgatactgcagtactatacaaacacccaagg
ggtggatcttttaaaactgctcttagagttcttgccaagagatttctttctagggagata
caacagtcaggaactggacatgacagtattgaagatgcaagagctactatggagctggca
cttttgaagatcagaaatggacctgattttggttctcctccatcatttatgcggagaaag
cttcttacggttttgagtgagtgtggaaaaacttcctctcttattgacgatgtttcagta
gtcaagaggtatgcttctgagtcatcccatgcaatgccggtgtcttctgatgatgaagct
cttttaaaggctagaaaggaggtgaagaacgatcgggtacaatttgtctggactcagttc
tcagaattatattcgtatttcaagaaacaagtagaggatgaagcaaatctgaacggaaaa
cttgcagagatgatatcattggttacatgcgataagaagcctgctaacacgaaagacatt
aaaagtggtgtttcatctgaattgaaggaaattctaacccgtacggatgccagagttcgt
agtctctgtgctgcattacccactaatactatgcttataatttgctctggacatggagac
actgctattgtccaaagagtaaggaaaatgctcagagagcagagtgaaacgtcattgtgc
cgcgagaagattgttaaggtattggaagagcttcaggctcaagctgaagttgcattgtgt
tttgttggcgtgaagcattga
DBGET
integrated database retrieval system