KEGG   Pistacia vera (pistachio): 116106359
Entry
116106359         CDS       T07386                                 
Name
(RefSeq) small RNA degrading nuclease 5
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    116106359
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvy03009]
    116106359
Ribosome biogenesis [BR:pvy03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    116106359
SSDB
Motif
Pfam: RNase_T MCM4_WHD
Other DBs
NCBI-GeneID: 116106359
NCBI-ProteinID: XP_031248575
LinkDB
Position
Unknown
AA seq 566 aa
MLSPKQKSEAEGEASEQDSSNDGRAGFFNIYGPQAKSEVVFKMPEANSTLNLQDVQGLVT
WVLAEGFMPSWVFIKNKPLIPKVVMLYLPGLDASLYLSQSKLLTGFKEFCGNPRALLALS
CVADSMQTIDSLLTCKLKRKRNELDSMKKSTQTSEQVTDNPSSVELLKDLPFPITYYTLM
AKELEENGYCLNQPGFLSTTPAPLGSSPYEILALDCEMCVTNEGFELTRITLVDMKGQVV
LDKLVKPSNAIVDYNTRFSGITCEMLSGVTTSLKDIQEEFLKLVYKETILVGHSLENDLL
ALKISHGSVIDTAVLYKHPRGGSFKTALRVLAKRFLSREIQQSGTGHDSIEDARATMELA
LLKIRNGPDFGSPPSFMRRKLLTVLSECGKTSSLIDDVSVVKRYASESSHAMPVSSDDEA
LLKARKEVKNDRVQFVWTQFSELYSYFKKQVEDEANLNGKLAEMISLVTCDKKPANTKDI
KSGVSSELKEILTRTDARVRSLCAALPTNTMLIICSGHGDTAIVQRVRKMLREQSETSLC
REKIVKVLEELQAQAEVALCFVGVKH
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgctgtctccaaagcaaaagagtgaagctgaaggtgaagcttcagagcaagatagttca
aacgacggccgtgccggtttcttcaatatatatggacctcaagcgaaatcagaagttgtt
ttcaagatgcctgaagctaattctaccctgaacttgcaagacgttcaaggccttgtaact
tgggttcttgctgaaggattcatgccctcctgggtattcattaagaacaaaccgttgatt
ccaaaagtagtcatgctttacctgccgggcctggatgcttctttgtacttatcacagtcc
aaactacttactggttttaaagaattctgtggcaatccgagggcacttttagcccttagt
tgtgtagcagatagtatgcagacaatagactcactgctaacatgcaagttgaaaagaaag
agaaatgagcttgattcaatgaagaaatctacccagacatcagaacaagttacggataat
ccatcttctgtggaactcttgaaagatctaccattccccattacatattatacactgatg
gcaaaagaattggaagagaatggatattgtctcaatcaaccaggctttctatctactact
cctgctcctttgggatcttctccctacgaaatattggcgcttgactgtgagatgtgtgtc
acaaatgagggttttgagctcacaagaataacactagtggatatgaaaggccaggttgtt
ttagacaaattggttaaaccttcaaatgccattgtggattacaacaccaggtttagtgga
attacatgcgagatgttgagtggagtaactacaagtcttaaagatatccaggaagaattt
ctaaagctggtttacaaagagaccattctagttgggcattccttggagaatgacttatta
gctttgaagatttcccatggttcggtgattgatactgcagtactatacaaacacccaagg
ggtggatcttttaaaactgctcttagagttcttgccaagagatttctttctagggagata
caacagtcaggaactggacatgacagtattgaagatgcaagagctactatggagctggca
cttttgaagatcagaaatggacctgattttggttctcctccatcatttatgcggagaaag
cttcttacggttttgagtgagtgtggaaaaacttcctctcttattgacgatgtttcagta
gtcaagaggtatgcttctgagtcatcccatgcaatgccggtgtcttctgatgatgaagct
cttttaaaggctagaaaggaggtgaagaacgatcgggtacaatttgtctggactcagttc
tcagaattatattcgtatttcaagaaacaagtagaggatgaagcaaatctgaacggaaaa
cttgcagagatgatatcattggttacatgcgataagaagcctgctaacacgaaagacatt
aaaagtggtgtttcatctgaattgaaggaaattctaacccgtacggatgccagagttcgt
agtctctgtgctgcattacccactaatactatgcttataatttgctctggacatggagac
actgctattgtccaaagagtaaggaaaatgctcagagagcagagtgaaacgtcattgtgc
cgcgagaagattgttaaggtattggaagagcttcaggctcaagctgaagttgcattgtgt
tttgttggcgtgaagcattga

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