Pistacia vera (pistachio): 116106433
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Entry
116106433 CDS
T07386
Name
(RefSeq) RNA-binding protein Y14-like
KO
K12876
RNA-binding protein 8A
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
pvy03015
mRNA surveillance pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116106433
09122 Translation
03013 Nucleocytoplasmic transport
116106433
03015 mRNA surveillance pathway
116106433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116106433
03041 Spliceosome [BR:
pvy03041
]
116106433
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116106433
Spliceosome [BR:
pvy03041
]
Complex C
Other components
EJC/TREX
116106433
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
116106433
NCBI-ProteinID:
XP_031248660
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MANTEVDALDFEDDDLMDEDGAVDVDASSSPRAAAPQPKLKSAITGGAPKKTKGRGFREE
GDNERHSRLADRNFDSLGSDGGPGPQRSIEGWIILATGVHEEAQEDDLQNAFGEFGEIKN
LHLNLDRRTGFVKGYALIEYENFEEAQNAITAMNGTELLTQTINVDWAFSNGPSTGPFKR
KNMRSARTHRSRSPRRRY
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacggaagtggatgcgttggacttcgaagacgacgacttgatggacgaggac
ggtgccgtcgacgtcgatgcttcctcctctcctcgcgctgccgcccctcagcccaagctc
aagtctgccatcaccggcggcgcccctaagaagaccaaaggccgtggcttccgtgaagaa
ggcgacaacgaacgccatagccgcctcgctgaccgtaacttcgactcccttggctctgat
ggtgggcccggcccccaacgatccattgagggatggatcattttggccactggggtacat
gaggaggcgcaggaggatgatttgcaaaatgcttttggtgagtttggggagataaaaaac
ttgcatttaaatcttgatcgccgtaccggttttgtgaagggatatgcactgattgaatat
gagaatttcgaggaagctcaaaatgctataactgctatgaatggaactgaacttctcacg
cagactattaatgttgactgggccttcagcaatgggccaagcactggacccttcaaaaga
aagaatatgagatctgcacggacacatcgctcaaggagtcctaggaggcgatactga
DBGET
integrated database retrieval system
