Pistacia vera (pistachio): 116106655
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Entry
116106655 CDS
T07386
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03030
DNA replication
pvy03410
Base excision repair
pvy03420
Nucleotide excision repair
pvy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116106655
03410 Base excision repair
116106655
03420 Nucleotide excision repair
116106655
03430 Mismatch repair
116106655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvy03032
]
116106655
03036 Chromosome and associated proteins [BR:
pvy03036
]
116106655
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116106655
DNA replication proteins [BR:
pvy03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116106655
DNA Replication Termination Factors
ELG1-RFC complex
116106655
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116106655
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116106655
Check point factors
HRAD17(Rad24)-RFC complex
116106655
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad17
RFC_C
nSTAND3
RuvB_N
RsgA_GTPase
AAA_18
AAA_16
AAA
Motif
Other DBs
NCBI-GeneID:
116106655
NCBI-ProteinID:
XP_031248868
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MDKIKKNIDEGCLNDDYQEIKKPLEDNFHVSVAKINEYKEEERVNWAKKHQPQALKDFIC
HKEKAEILRTLVTTEKSSHYIIEGPPGVGKRTMARALLREDIGPEITEPREEFKLFHLKN
ALQKWPVTHLQLKVIISSQHIEVNLDDLKGYEADVVIQLFQEIEAGLVPQERLLQGDQAN
YGGNSIMGSNQIPHVCRAITLCTAEKLPKDSQLHIQSLLETFKGHCKVIFCCHDVSQLHK
LSSVCKIIQLLPPSEKEIIEVLDFIAEQEDIELPLQLAKHMAEKSRNCLQQAIRSFEATW
QSNYPFKDGQFIMNGWEEELAMMAKSIIEEQSPKRLFIVRQKLITLFEHNLSPDFIFSTL
VEELEKRMDGRIKRQTEISYQEYRADNASGHFDGDTFKIQNTKNNFQCFLLIEEFIAKFM
SHYKCYRGSLH
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcaagaagaatatagatgaaggttgcttgaatgatgattatcaagagatt
aagaagccattagaagacaattttcatgtatcagttgctaagataaacgagtataaagaa
gaagagagagtgaattgggcaaagaagcatcagccccaggcattgaaagacttcatctgc
cataaagagaaagctgaaatactgcggactttggtgacaactgaaaaatctagtcattac
ataattgaaggccctccaggagtcggaaagagaaccatggctcgcgctttgcttagagaa
gatattggaccggaaatcacagagccaagagaggaattcaaattatttcatttaaagaat
gcattacagaagtggccagtcacccatctccaacttaaagtgataatatcttctcagcac
atagaagtcaatctagatgacctaaaaggttatgaagcggatgtagtcatacagctattt
caggaaatagaagctggtttagtgccacaagaaagattattgcagggtgaccaagcaaat
tatggaggtaattcaattatgggttcgaatcaaattccacatgtttgtagagcaattact
ctatgcacggcagaaaagttgcccaaggattcccaacttcatatccaaagtcttttagag
acttttaaaggccattgtaaagtcatcttctgctgccatgatgtttcccagcttcacaaa
ctcagttccgtctgcaaaattattcaacttcttccaccttcagaaaaggagattattgaa
gtcttggacttcattgctgaacaagaagatattgaattgcctctccaactggctaaacat
atggcagagaagtctaggaattgccttcaacaagctattcgttcatttgaggccacttgg
cagtcaaattatcccttcaaagatggccaatttattatgaatggctgggaagaagaactt
gcaatgatggccaaaagtatcattgaagagcaaagtccaaaacggttgtttattgtcaga
caaaagcttataactttgtttgagcacaatttatccccagatttcatttttagtacattg
gtggaagaattagagaagcgtatggatggtcgaatcaagcggcaaactgaaatttcatac
caagaataccgtgctgataatgcttcaggccattttgatggagatacattcaagatacag
aacacaaagaataattttcaatgctttctgctcatagaagaattcatagcgaagttcatg
agccactacaagtgttacagaggaagcctgcactaa
DBGET
integrated database retrieval system
