Pistacia vera (pistachio): 116106670
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Entry
116106670 CDS
T07386
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
116106670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvy04040
]
116106670
Ion channels [BR:
pvy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116106670
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Cytomega_TRL10
Motif
Other DBs
NCBI-GeneID:
116106670
NCBI-ProteinID:
XP_031248881
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MSKKLEIGSTWGSGLYIAAYIIVIVIHPLHYYAYVIKQDQNCLEIDNELYATVAPVLFFN
AYMMLYTPYFFKRVIAPRNSKTVIGHFIFTQIPILFMTLTVILDLTTGTTDKIFLTIANL
FLFGYILLVIGLSLTIKYATEGTSYLAHAKWSMLYTIFFFTCLEVTCFGQSLLPSTFITE
NIFVVSIIIYSTVLFVFLIGNMQTYLAPEDKQTESEKKEKEMSVLLPIHEEMTLFQVQEP
EQSTLILKEQTAEQCVSFRKLRQELQMEVINNLQLNKWRATKILHIETLFNILPEDLLRD
IKIELCLPQLRNIKVEEFRNLGELALKDLCYHVKLVFYLDRTLIFREGDPITEMLFVLHG
EIRTHNSRGIGYLKDGGFFGKELVTSFNNQAEAYLSSLPISPRTVQAITNVEAFVLMAYD
LKKIFTKHNQQQTN
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaattagaaataggttctacttggggaagcggcctatatattgcggcttat
ataattgttatcgtaatacatcctttgcattactacgcttatgtgatcaaacaagatcaa
aattgtctcgaaatcgacaatgaattatatgccacggttgctcctgtcctcttctttaat
gcttatatgatgctctatactccctatttttttaaaagagtcattgcacctcgtaattct
aaaaccgtgatcggacattttatctttactcaaataccaatattgttcatgacattgaca
gttattcttgatttgacaacgggaacgacagacaagatctttttgacgatagctaacttg
tttcttttcggatatattctactggttattggactgtcattaactattaaatatgctact
gagggtactagctatcttgcccatgctaagtggtcaatgctatacacaatctttttcttt
acctgcttggaggtcacttgtttcggccaaagcctgttaccaagtacatttatcacggaa
aatatttttgtggtttctataatcatctattccacggtgctgtttgtctttttaatcgga
aatatgcagacatatctggcacccgaagataagcagacggagtcagagaaaaaagaaaaa
gagatgtcggttctattgcctatacatgaggagatgacgttgtttcaggtacaagaaccg
gagcagtcgactttaatattgaaggagcaaacggcggagcagtgcgtgtccttccggaag
ctccgtcaagaattgcaaatggaggtgataaacaatttgcagctaaacaaatggcgagca
accaaaattcttcacatagaaactttgttcaatattcttcctgaggatctcctcagagac
ataaagatcgaactttgcttaccgcagttgaggaatatcaaggtagaagagtttcgaaac
ttgggggaactagcgttgaaggatctgtgttatcatgtcaagctagttttctatcttgac
cgcactctgattttccgggaaggagacccgattaccgagatgctcttcgtgctgcacgga
gaaatacggacacacaactccagaggcattggttatttgaaagatggtggattctttggg
aaagaacttgtcacctcgtttaataatcaggctgaagcctacttatccagcctcccaatc
tcaccaagaactgttcaggcaattacgaatgtggaagcctttgttctcatggcttatgac
ttgaagaaaatatttactaagcacaatcagcagcaaacaaattaa
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