Pistacia vera (pistachio): 116107093
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Entry
116107093 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvy03110
]
116107093
Chaperones and folding catalysts [BR:
pvy03110
]
Heat shock proteins
HSP100
116107093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
ClpB_D2-small
AAA
AAA_lid_9
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
RuvB_N
AAA_18
TsaE
Zeta_toxin
IstB_IS21
AAA_7
AAA_14
TIP49
TniB
NBD_SMAX1
Torsin
AAA_25
ATPase_2
bpMoxR
MazE_antitoxin
SRP54_N
RasGEF_N_2
HTH_3
Motif
Other DBs
NCBI-GeneID:
116107093
NCBI-ProteinID:
XP_031249244
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MEKLEKQGPVQLEMLNKYATDLNEMAKEGKLDPLIGRQQELERVIQILCKRRKNNPCLLG
DPGVGKTVIVEGLAQRITNNTSPVKLQRKKIYPLDMGRLIAGASNRGEYEERLTKLIDEV
KLSEGSIILFIDEVHTLIGAGSXGQAVDAADIMKPALARGELRCIGAITFDEYKKYIEKD
AALKRRFQQVLVPEPSVAGTIEILLALCSKYESHHNVKYTVNSLAAATQLSHQYISDWFN
LDKSIDLIDDAGAKLVIHQTKGSLGTKMLISEDNIKEMVSTWTRILVEKISSEESHQLLQ
MEKTLQKHIIGQAEAVEDISRAIRRARVGIRDPSRPISSFLFTGPIGVGKTELAKALPVE
YFGSKDAMIRIDMSEYMERHTVSKFFGSPPGYVGSENGGQLTEAVXHRPHSLILFDEIEK
AHCDVLNIMLQVLYGGRLTDNKGQTVYFKNTIIIMTSNIGGNLIFKKSHLGFDHVEMKVA
EELKKNFRPEFLNKIDEVIVFRPLSNSQLKEIVEIMLKQLYERLKEKNIKVEVTERFKEE
IVNEGYNPSYGARPLRRAIGRLLEDNLAERILNGSIKQGDSVTIHVDSNGKILVHCKISA
TFGNGKGSLQRNIIGQPKAVEAVSRAVHKAKVGIRDPSQPLSSLLFAGSNGVGKTELAKA
LAVEYFG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacttgagaaacaaggtcctgttcagctggaaatgctaaacaaatatgctaca
gacttaaacgaaatggcaaaagagggcaagttggatcctctcatcggaaggcaacaggaa
cttgaacgtgtcatccaaatactgtgcaaaagaaggaagaataacccatgcctgcttggc
gatcctggtgttggaaaaactgtaatcgttgaaggcttagcacagaggattacaaataat
acttctccagttaaactccagagaaagaagatatatcccttggacatggggcggcttata
gctggggcatcgaatcgaggagaatatgaggagaggttgacgaaattgatagatgaagta
aaattgagtgaaggatccatcatcctcttcattgacgaggtgcacactcttataggtgct
ggttcttgaggacaagcagtagatgctgctgacataatgaaacctgcccttgcaagagga
gaattaaggtgcattggtgccataacatttgatgaatacaagaagtatattgagaaggat
gctgccttgaaaaggcggtttcagcaggttttagtgcctgaaccatcagtggctgggaca
attgagattctgctagctttgtgctcaaaatatgaatctcatcacaatgttaaatacaca
gtgaactctttagcagcagccactcagctttcgcatcagtatatcagtgactggtttaat
ctcgacaaatcgatagacttgattgatgacgctggcgccaaattggttatacatcaaaca
aagggatcactaggaacaaaaatgttgataagtgaagataatataaaggagatggtctct
acctggaccagaattctagtggagaaaatttccagtgaagaatctcaccagcttttgcaa
atggaaaagactttgcagaagcacattattggtcaggctgaagctgttgaagatataagc
cgtgccatccgtagagcaagagtgggaatcagagacccaagtcgcccgatatcaagcttc
ttattcactggtcctattggagttggaaaaacagaacttgcaaaagctttaccagtcgaa
tattttgggtcgaaagacgccatgataagaatcgacatgagcgagtacatggagagacat
actgtttccaagttttttggttcacctccgggttatgttggctctgaaaatggtggccaa
cttacagaagctgtangccaccggcctcacagtttgatcctcttcgatgagattgagaag
gctcattgtgatgtattgaatattatgcttcaggttttatatggtggtcgtttaacagat
aacaaagggcagaccgtgtacttcaaaaacaccattataataatgacctcaaatatcggt
ggtaatttgattttcaagaaaagtcatctggggttcgaccatgtggagatgaaagttgca
gaggagctgaaaaagaatttcaggccagagttcttgaacaagattgatgaagtgattgtt
ttcaggccattgagtaactcgcagctgaaagaaatcgtggagatcatgctgaaacaattg
tacgaaagactgaaagaaaagaacataaaggttgaagtgacagagagattcaaggaagaa
attgtgaacgaaggttataatcccagctatggagcgaggcctttgagaagggcaattggg
aggctcttggaggacaatttggcagagaggatattgaatggaagcattaaacagggcgat
tcagtgacaatacatgttgattcaaatggcaaaatattggtgcattgcaaaatctcagcg
acttttgggaatggaaaaggctctctgcagaggaatataattgggcagccaaaagctgtt
gaggccgtcagccgcgccgtgcataaagctaaagtgggaattagagacccgagccaacct
ttatcaagcttgttatttgctggttctaatggcgttggaaaaacagaacttgcaaaagcc
ttggcagttgaatattttgggtaa
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