KEGG   Pistacia vera (pistachio): 116107341
Entry
116107341         CDS       T07386                                 
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116107341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvy03041]
    116107341
Spliceosome [BR:pvy03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    116107341
 Complex B
    116107341
 Complex C
   U2 SnRNP specific factors
    116107341
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 116107341
NCBI-ProteinID: XP_031249482
LinkDB
Position
Unknown
AA seq 377 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERILAANNPGTQKSRPHTLFASGPPTLQNTQANGAVG
GPMPPRPFANGAAPGPIPAIRPAPPPPPPQSGAFASIQVAGQAAWQGQPQQLGQGVPQQV
LPPPGMQYRPPPANMPPPPQVPSMHQRPPPPPMGMGGQPPVWRPPPPPQQQQLGRPPMQH
MGMAPPPPPNVPAPPPN
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgacgactcgaatcgctcctggagtcggagccaatttgctcggccaacactctgccgag
cgaaaccaagacgccactgcttatgtcggcaatctcgatccacaggttaccgaagagtta
ctgtgggaattgtttgttcaagctggtcctgttgttaacgtgtatgttccaaaagataga
gtgacaaaccttcaccaaggatatggatttgtagagttccgaagtgaagaagatgccgat
tatgcaattaaagtgcttaacatgattaagctatatgggaagcctatacgagtgaataag
gcatcccaagataaaaagagcttggatgtgggggcaaacctttttattggaaaccttgat
cctgatgtggatgagaaactactttatgatactttcagtgcatttggagtcattgttaca
aatcccaagataatgagagatcctgatactgggaattcccgtggctttggtttcataagt
tatgattcttttgaggcatctgatgcagctattgaggcaatgaatggtcagtacctttgt
aaccggcaaattactgtctcatatgcttataagaaagacactaaaggagagcgccatggt
accccagctgagagaattttggcggctaataatccaggtactcagaagagtagaccacac
actttgtttgccagtggacctccgacacttcagaatactcaggccaatggtgctgttggg
ggacccatgcctcctcggccttttgcaaatggtgctgctccaggtcctattccagctatt
cgcccagcaccaccaccaccaccaccacaatctggagcctttgcgtccattcaggttgct
ggacaagcagcttggcagggtcagcctcagcaattaggtcaaggagtaccgcaacaggtc
ctgcctccgccaggtatgcagtacaggccacccccagcaaacatgccaccacctcctcag
gtaccttcaatgcatcaaaggccacccccaccaccaatgggaatgggtggtcaaccacct
gtctggcggcctccaccacccccacagcagcaacagctaggaagaccccccatgcagcat
atgggaatggcaccacctcctccgcccaatgtccctgcaccacccccaaattga

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