KEGG   Pistacia vera (pistachio): 116107485
Entry
116107485         CDS       T07386                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03420  Nucleotide excision repair
pvy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    116107485
  09124 Replication and repair
   03420 Nucleotide excision repair
    116107485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pvy03051]
    116107485
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116107485
Proteasome [BR:pvy03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    116107485
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      116107485
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD UBA_7 UBA_RAD5A CUE Rad60-SLD_2 UBA_3 Ubiquitin_5 Crinkler Dsc3_N TECR_N Ubiquitin_4
Other DBs
NCBI-GeneID: 116107485
NCBI-ProteinID: XP_031249606
LinkDB
Position
Unknown
AA seq 426 aa
MKIFVKTLKGTNFDIEVKPEDTVVDVKKKIETVQGSDVYPAAQQMLIFQGKVLKDDTTLE
ENKVTENSFVVIMVTKTKKPSGEGSTTSTTPTAKAPQTSTPTPAPAAATVPETPVPTSAP
PASVPAPAPAPVPVAAPAPAPAPIPATAPAPAPIPATAPVPAPAPAPAPVALVTATSESN
VYGEAASNLVAGNNLEGAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPEQ
AEAPPVARVPVSGQATNSPTQPTQPTQPTPAPASGPNANPLDLFPQGLPDMGSGAAGAGT
LEFLRNSPQFQVLRAMVQANPHLLQPMLQELGKQNPALVRLIQEHQADFLRLINEPVEGG
EGNIGGQLSGAIPQAITVTPEEREAIERLEAMGFDRATVLEVFFACNKDEEVAANYLLDH
MHEFED
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgaagattttcgttaaaacactcaaaggcactaatttcgacatcgaagtaaaacctgaa
gacacggttgttgatgtgaaaaagaagatagaaacagttcaaggatctgatgtttatcct
gcggcacagcagatgcttatttttcaggggaaagtcctcaaagatgacactacactggaa
gagaacaaagtaactgaaaatagttttgttgtgattatggtaactaagactaagaaacca
tctggtgagggttcaacgacatcaactacacctacagctaaggctccccaaacaagtact
ccaaccccagcaccagctgcggcaacagttcctgagactcctgtaccaacatcagcaccg
cctgcatccgttcctgctcctgcccctgctcctgtgcccgtagctgcccctgcccctgcc
cctgcccctatccctgccactgcccctgcccctgcccctatccctgccactgcccctgtc
cctgcccctgcccctgcccctgcccctgtcgcattagttactgctacgtcagaatccaat
gtctatggcgaagccgcatcaaatctggttgcagggaataacctggagggagcaatccag
caaattcttgatatgggtggaggtacttgggatagagatactgttgtccgtgctctccgt
gctgcttacaataacccggagagagctgttgaatatttgtattctggtatccctgagcaa
gctgaagctccgcccgtggcccgtgtccctgttagtgggcaagctacaaactctcctacc
cagcctacacagccaacccaaccgacacctgctcctgctagtggacccaatgcaaaccct
ttagacctctttccacagggccttcctgacatgggctcaggcgcagctggtgcaggaact
cttgaattcttacgtaatagtccacagtttcaagtcctgcgagctatggtgcaggccaac
ccacatttattgcagcccatgcttcaagagttggggaaacaaaatcctgcattagtgagg
cttattcaggagcatcaggctgacttccttcggcttatcaatgaacctgtcgaaggtggt
gaggggaatatcgggggacagctttctggggcaattcctcaggcaataactgtcacgcct
gaagagcgtgaagcaatagaacggcttgaagcaatgggctttgatcgggcaacagtattg
gaggtgttctttgcctgcaacaaggacgaggaagtggctgccaactatcttctggaccac
atgcacgagtttgaggattga

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