Pistacia vera (pistachio): 116107726
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Entry
116107726 CDS
T07386
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
116107726
Enzymes [BR:
pvy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
116107726
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
116107726
NCBI-ProteinID:
XP_031249886
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All DBs
Position
Unknown
AA seq
626 aa
AA seq
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MSNGLVQVTLSNPDGEVIGINYNGIDNVLETDNDQDNRGYWDVVWYKPGDEETIDKLEGT
NFKVIMADEDQVEVSFSKKWNSSLHGSNVPLNVDKRYIMRRGVSGLYAYAIMEREPGWPD
VDMDQIRAVFKLQKDKFHYMAISEERQRVMPMPEDRATGQPLAYPEAVLLTKPTNPELRG
EVDDKYQYSMESKDTELHGWISSDPPVGFWMITPSAEFRSSGPIKQDLTSHVGPTVLSMF
TSIHYGGKDIDTEYRNGEPWKKVMGPVLVYLNSVSSDKDTYADLWKDAKKQMREEIKSWP
YDFPQSKDFPKSHQRGNVSGQLQVDDRYINSSIIGAKFGYVGLAAPGEVGSWQTETKCYQ
FWTQTDGKGSFFIKNVREGNYNLYAWVPGFVGDYKHNINITVKAGSEFKLGAIVYRPPRS
GPTLWEIGVPDRSAAEFFVPDPYPTLMNRLYTNHTTDKFRQYGLWTRYADIYRNGDLKYT
VGVSDYTRDWFFAHVTRDIGNRTFQATTRQIMFELPYVDNPGNYTLQVALASASDSEFQV
RINDANAVKPHFSTGLIGRDNAIARHGIHGLYRFYSIKVPSNKLYRGNNTIYLTQSRSKS
PFQGILYDYIRLEGPCAVKLGEAKTL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgggttagtccaagtgactctgtcgaacccagatggtgaagtcataggaata
aactacaatggaattgataatgtgttagaaacagataatgatcaagataatcgagggtac
tgggacgtggtttggtataagccaggagatgaagaaaccatcgacaaattagaaggaaca
aactttaaggtgattatggcagatgaagaccaagtagaggtttcattctcaaaaaaatgg
aatagttccctacatggatctaacgttcccttaaatgtagacaaaaggtatataatgcgg
cgtggtgtatctggattatatgcgtatgccataatggaacgagaaccaggctggcccgat
gtcgacatggatcaaattagagctgttttcaagctccaaaaagacaagttccattacatg
gcaatatcggaggagaggcaaagagtaatgccaatgccggaagaccgtgcaacgggtcag
cctcttgcctaccccgaggctgttctcttgaccaaaccaacaaatccagaattaagagga
gaggtggatgacaagtaccagtactcgatggaaagcaaagatactgaattacacgggtgg
atatcatctgatccgcctgtgggtttctggatgatcacacccagtgccgagttccgatca
tctggcccgatcaagcaagatctcacctcccatgttggccctacggttctctctatgttt
actagtatacattatggtgggaaggatatagatacagagtatcggaatggagagccctgg
aaaaaagtaatgggtcctgttcttgtctatctaaactcagtttcatctgataaagatacc
tatgcagatctttggaaagatgctaaaaaacagatgcgggaagaaattaaaagctggcca
tatgatttccctcagtcaaaagattttcctaaatcccatcaaaggggaaacgtttccggt
caattacaagtcgatgaccgatatatcaattcgagtataataggggcaaaatttggatat
gtggggttggcagcacctggagaagtgggatcatggcaaactgaaacgaagtgttatcag
ttctggacacagaccgacgggaaagggagtttcttcataaaaaatgttcgagaagggaac
tataatttatatgcatgggtccctggatttgttggagattacaagcataacattaatatt
actgtcaaagcaggatcggagttcaagttgggagccattgtgtataggcctcccagaagt
ggtcctacattgtgggagattggtgttccggatcgctccgctgctgaatttttcgtgcca
gacccctatccgacactcatgaaccgactgtacactaaccacaccactgacaagtttagg
caatacggattatggacaagatatgcagatatatatcgtaatggtgatctcaagtacacc
gtcggcgttagtgattatactcgagactggttttttgctcatgttaccagggatatagga
aataggacatttcaagcaaccacacggcagattatgtttgagcttccatatgttgataat
ccaggaaattacacacttcaagtggccttagcatcagcctccgactctgaatttcaggtt
cgaatcaacgacgcaaatgccgttaaacctcatttctcaacagggctaatcggaagggac
aatgccatagccagacatggaattcatgggttgtacaggttttacagtattaaagttcca
agcaataaactctacagaggaaacaacacaatctatctaactcagtcaagaagcaaaagc
cccttccaagggatattgtatgactacattcgcttagaaggcccctgtgccgtgaaactt
ggtgaagccaaaacgctgtag
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