Pistacia vera (pistachio): 116107956 Help Entry 116107956         CDS       T07386                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism pvy  Pistacia vera (pistachio) Pathway pvy03040   Spliceosome Brite KEGG Orthology (KO) [BR:pvy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     116107956  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvy03019]     116107956    03041 Spliceosome [BR:pvy03041]     116107956 Messenger RNA biogenesis [BR:pvy03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      116107956 Spliceosome [BR:pvy03041]  Complex B   Other components    Prp19-related factors     116107956  Complex C     116107956 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_15 TPR_19 ARM_TT21 ARM_TT21_C Motif Other DBs NCBI-GeneID:  116107956 NCBI-ProteinID:  XP_031250098 LinkDB All DBs Position Unknown AA seq 920 aa AA seqDB search MTISKELYPSQDDLLFEEELLRNPFSLKLWWRYLIARLESPFKKRFVIYERALKALPGSY KLWHAYLRERLNIVKNLPITHPQYETLNNTFERALVTMHKMPRIWIMYLETLTKQKLITK TRRTFDRALCALPVTQHDRIWEIYLRFVEQKGIPIETSLRVYRRYLKYDPSHIEDFIEFL VNSSLWQESAERLASVLNDDQFFSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG IRKFTDEVGRLWTSLADYYIRRNLFEKARDIFEEGMSTVVTVRDFSVIFDAYSQFEESMV AHKMETMESSDEEKEDVVEENGFEEDEDVRLDLNLSIAKLEKKILHGFWLHDDNDVDLRL ARLEHLMNRRPELANSVLLRQNPHNVEQWHRRVKIFEGNPTKQILTYTEAVRTIDPMKAV GKPHTLWVAFAKLYESHKDVANARVIFDKAVQVNYKAVDHLASVWCEWAEMELRHKNFRG ALDLMRRATAEPSVEVKRRVAADGNEPAQMKLHKSLRLWAFYVDLEESLGTLESTRAVYE RILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRY GKTKLERARELFDNAVETAPADAVKPLYLQYAKLEEDYGLAKRAMKVYHQATKAVPNHEK LEMYEIYIAQAAEIFGVPKTREIYEQAIESDLPDKDVKTMCLKYAELEKSLGEIDRARAV YVFASQFADPRSDSDFWNRWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQ KDQRLTIDDAKDKLKQAGVLEDEMAALERQLAPATDNTTAKDSSRKVGFVSAGVESQPDN GIKASANHEDIELPDESDSEDEEKVEIAQKNVPAAVFGGLGRKREESEKEEDGDDTVAVK DKDSENRLGALERIKRQKRV NT seq 2763 nt NT seq  +upstreamnt  +downstreamnt atgaccatttccaaggagttatacccttcacaagacgatctcttgttcgaagaggagctc ctgagaaatccctttagtctcaagctctggtggcgttatttgattgccagacttgagtct cctttcaagaaacgttttgtaatttatgaacgagcgctaaaagcattgcctggaagctac aagctttggcatgcctatttacgtgagcgccttaacattgtgaagaacttgccaatcact cacccacagtatgaaacccttaataacacatttgagagagcccttgttaccatgcataaa atgcccagaatttggattatgtatctggagactctaaccaagcagaagttgattactaaa actcgtagaacgtttgatagggcactttgtgctttgcctgtgacgcagcatgatcgaatt tgggagatatatttgcggtttgtggagcagaaaggtattccgatagaaacatctcttagg gtttataggaggtacttgaagtatgatccgtctcacattgaggattttattgagtttttg gtgaattcaagtctttggcaagagtctgcagagaggttagcttcggtgttgaatgatgat cagtttttttcaataaaggggaaaacaaagcataggttatggttagaattgtgtgatttg ttaaccagacatgcaacagaggtttcggggcttaatgtggatgctataattaggggtggg attaggaagttcacagacgaggttgggaggttatggacttcattggctgattattatatt cggagaaatttatttgagaaggcaagagatatatttgaggaagggatgtcaacggtcgtt actgtgcgggattttagtgtgatttttgatgcatactcacagtttgaggagagtatggtt gctcataagatggagacgatggagtcaagtgatgaggagaaagaagatgttgttgaggag aatggttttgaggaagatgaagatgttcgattggatttgaatttatcaattgctaagctt gagaagaagattcttcatggtttttggttgcacgatgacaatgatgttgatttaaggttg gctcgattggagcatctaatgaacaggaggccagagttggctaatagtgtcctcttaagg caaaatccacataatgttgaacagtggcataggagggtcaagatatttgagggtaatccc accaagcagattttgacgtacacagaggcagtgaggaccattgatcctatgaaagctgtg gggaagccccacactctttgggtcgcatttgctaagttatatgagagccacaaggatgtt gccaatgcaagagtgatttttgataaagcagtccaagtgaactacaaggctgtagaccac ctggccagtgtttggtgtgagtgggcagaaatggagttgaggcataaaaatttcagagga gcactggaccttatgaggcgtgccacagcagagccatcagttgaggtcaaacgaagagtg gctgctgatggaaatgagccagctcagatgaagttgcataaatccttgagactttgggcc ttttatgtggatttggaagagagcttgggtaccttggaatccactcgggctgtttatgag cgcatattggatttgagaattgccacacctcagattatcataaattatgcactgcttctg gaagagcataaatactttgaagatgcattcaaagtatatgaaagaggagtcaagattttt aagtatcctcatgtaaaagatatctgggtcacatacctctcaaagtttgtaaagagatat gggaagactaaacttgaaagggcaagagaattatttgacaatgctgttgaaacggcccct gctgatgcagttaaaccattgtatcttcaatatgcaaaactggaggaagattatggtcta gcaaagcgagctatgaaggtctatcatcaggctactaaagcagttccaaaccacgagaaa ttggaaatgtatgaaatatatattgcacaagcggctgagatatttggtgtaccaaaaaca agggaaatatatgagcaagcaatagagtctgatcttccagacaaagatgtgaagaccatg tgtttgaagtatgcagaactagaaaagagcttgggagaaattgatcgtgctcgtgctgta tatgtatttgcgtctcagtttgctgatccacgatctgattctgacttctggaatagatgg catgaatttgaggtacaacatggaaatgaagataccttccgagaaatgttacgcattaaa cggagtgtttctgcaagctatagccagacgcacttcattctcccagagtatctcatgcag aaagatcagagactgactatagatgatgccaaagacaaactgaaacaggctggggtcctt gaagatgaaatggctgcattggaaaggcaattagcacccgccacagacaatactactgcc aaagacagtagcagaaaagtggggttcgtgagtgctggagtggagtcccagcctgataat gggataaaagcctcagcaaatcatgaagacattgagctccctgatgaaagtgactcagaa gatgaagaaaaagtggaaattgcacaaaagaatgttccagcagcagtttttggaggtcta ggcagaaagagagaagagagtgaaaaagaggaggatggagatgatacagttgctgttaaa gataaggacagtgagaatcgtctcggcgccttggagagaataaagaggcagaagcgagtt taa

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