Pistacia vera (pistachio): 116108142
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Entry
116108142 CDS
T07386
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Module
pvy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116108142
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116108142
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
116108142
NCBI-ProteinID:
XP_031250276
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All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MAIRFFSTHLYWALLILSIYLHASDATQNYNVLKFGAKGNGVTDSTQAFIKAWAAACGSE
ESTTIYVPKGRYLLGSMAFKGDCKNSDIKIHIDGTLVAPADYRILGQADNWLSFEGVSGV
SIIGGALDAKGTALWNCKEKGTKCPNGATSLSFTNSNNIKINGLLSLNSQMFHIVFNGCQ
NVRVEGVRVIAAGDSPNTDGIHVQLSRNVMIKSSSIKTGDDCISIGPGTKNLWVERVTCG
PGHGISIGSLAKDMDEEGVQNVTIKNTTFIGTQNGLRIKSWARPSNGFVQGIRFIDAVMR
NVQNPIIIDQNYCPHNLNCPGQVSGIKINDVTYLNIRGTSATPVAIKLDCSKKYPCNGIR
LQNVNLKYLKKAAQSSCSNVIGKELGSVEPNNCI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaggttctttagtactcatctttactgggctcttctcattctctctatttac
ttacacgcatcagatgcaacacaaaactataatgtgttaaagttcggagccaaaggcaat
ggtgtaacagactccacccaagcattcatcaaagcatgggcagcagcctgtggttctgaa
gaatcaacaacaatttatgtgccaaaaggaagatatttgcttggctctatggcatttaaa
ggtgactgtaaaaattcggatattaaaatacacattgacggaacactagtggctccggca
gattaccgtatactaggtcaagctgataactggctaagctttgaaggggttagcggtgtt
tccattattggtggagcactggatgccaagggaactgcgttgtggaattgcaaggaaaaa
ggcactaaatgtcccaacggagccacgtcattgagctttactaattcaaacaacatcaaa
atcaatggactcttatcactaaacagtcagatgttccacattgtgttcaacggttgtcaa
aatgtgcgtgttgaaggagttagagtcatagctgccggagatagccccaacacagatggt
attcatgtccaattatctcgaaatgttatgatcaagagctcctccatcaaaactggggat
gattgcatctcaattggccctggcactaagaatttgtgggttgaacgtgttacatgtggc
ccaggtcatggcattagcattgggagcttagccaaggatatggacgaggaaggagtacaa
aatgtgacaattaaaaatacaactttcataggtactcaaaacgggttgaggataaagtca
tgggctagaccgagcaatggatttgttcaaggcattcggttcatagatgctgttatgcga
aatgtccaaaatcccattattattgaccaaaactactgccctcataacttaaattgtcct
ggtcaggtttcaggtatcaaaattaatgatgtgacctatctaaatatacgaggaacttct
gctacaccagtggctataaaattagactgcagtaagaaatacccttgtaatggaataaga
ctacaaaatgtcaatttaaagtatctaaagaaagctgcccaatcatcttgtagtaatgta
attgggaaagaattagggtcagttgaacccaacaattgtatatag
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