Pistacia vera (pistachio): 116108143
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Entry
116108143 CDS
T07386
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy00040
Pentose and glucuronate interconversions
pvy01100
Metabolic pathways
Module
pvy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116108143
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
116108143
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
116108143
NCBI-ProteinID:
XP_031250277
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All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MAIKCFHTHLYMFFLVFSIYNLHSSSAATNYNVLSFGAKGNGVTDSTQAFSKAWAAACGS
TESTTIYVPKGKYLLGSMTFKGDCKNTDINMRIDGTLVAPSDYRVLAQADNWLSFEGVSG
VSIIGGALDAKGSALWNCKAKGTNCPNGATTVSFSNSNNIKIKGLISLNSQMFHIVINGC
QNVHVERVKVIATGDSPNTDGIHVQLSRNVNIMSSSIKTGDDCISIGPGTKNLWIERVTC
GPGHGISVGSLGKDTNEEGVQNVTVQNTTFVGTQNGLRIKSWARPSNGFVQGIRFLDAIM
RNVQNPIIIDQNYCPHNLNCPGQVSGVQISDVTYQNIRGTSATPVAINLNCSTKYPCKGI
RLQNINLKYSNQVAQSSCSYVTGKELGLVQPNNFIATD
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaagtgcttccatactcatctgtacatgtttttcctcgttttctctatttac
aacttgcattcatcatctgcagcaacaaactataatgtgttaagttttggagccaaaggc
aatggtgtaacagattccacccaagcattcagcaaagcatgggctgcagcttgtggctcc
acagaatcaaccacaatttatgtaccaaaaggaaagtatttgcttggttctatgaccttt
aaaggtgactgcaaaaatacagatatcaatatgcgcattgatggaactctagtggctcca
tcagattaccgtgtactagctcaagctgacaactggctaagctttgaaggggttagcggt
gtttccatcatcggtggagcactggatgccaagggaagtgcgttgtggaattgcaaggct
aaaggcactaattgtcccaatggcgctacaacagtgagctttagcaactcaaacaatatc
aaaatcaagggacttatatcactaaatagccaaatgtttcacattgttatcaacggttgc
cagaatgttcatgttgaaagagttaaagtcatagctaccggcgatagcccgaacacagat
ggaattcatgtccaattatctagaaatgtcaatatcatgagctcttccattaaaactggg
gatgattgcatctcaattggccctggaactaagaacttgtggattgaacgtgtcacgtgc
ggccccggtcatggtattagcgttgggagcctgggcaaggatacaaatgaggaaggagtc
caaaacgtgacagttcaaaacacaacttttgtaggtactcaaaatgggttgaggataaag
tcatgggctagacctagcaatggatttgtccaaggcattcggttcttagatgctattatg
cgaaatgttcaaaatcccattattattgaccaaaactattgtcctcacaacttaaattgt
ccaggccaggtttcaggtgtccaaattagtgatgtaacatatcaaaatattcgtggaaca
tctgctacaccagttgctataaatttaaattgtagcacaaaatacccttgcaaaggaata
agattacaaaatataaacttgaagtattcaaaccaagtcgctcaatcatcttgtagttac
gtaaccgggaaggaacttggcttggttcaacccaacaattttattgccactgactga
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