Pistacia vera (pistachio): 116108299
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Entry
116108299 CDS
T07386
Name
(RefSeq) nuclear pore complex protein NUP54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116108299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116108299
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116108299
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
DUF6200
Motif
Other DBs
NCBI-GeneID:
116108299
NCBI-ProteinID:
XP_031250410
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MFGAQPSMPTFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPSSTPAFGTPS
STPAFGGPSLTPGFGTPSTASFGSSLFSTPFSSQPQQQQQQQQQQQQTPLFQQPANNAFT
GFGFQTQSTPSQPTPFPNSQLTTQMAPVAPLPFSLADRDIQAIVDAYKDDPTNPKYAFKH
LLFSVTEPQYRVKPAGVSDIMWAEAMGKLEGMDSTDRERLWPQLVQGFKDLSHRLKVQDE
VILSDAERLRITQSNVKTLQRHFQAETLPWIERMKQKEQSLQRRLLRVMRIVEALEGKGC
RLPLMKGEGELAEKLAAVTRQLKGSGAELSRRVQSLLTVSRVQANTFGAGGSLYLPGSTK
IHEQSLADMQEVLQQQTEAIARLGNVLKRDIRDMEIIMAEDTEMTEDVS
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaaccttcaatgccgacgttcggcactccatcttcgacgccggcattc
ggcactccatcttcgacgccggcattcggcactccatcttcgacgccagccttcggcact
ccgtcttcaactccagccttcggcacaccgtcttcgacgccagcctttggtactccgtct
tcaacgccagccttcggtggtccgtctttgacgcctggctttggcactccgtctacagcg
tcgttcggatcttctttattttcaactccattctcttcacaacctcaacaacaacaacaa
caacaacaacagcagcagcagactccgctttttcagcaaccggctaataacgcatttact
ggattcggatttcaaactcaatctaccccgtcacagccaacgccctttccaaattctcaa
ttgactactcagatggctcctgtggccccactccccttctctctcgccgatcgcgacatt
caggctattgttgatgcttacaaggacgaccctacaaaccctaaatatgcttttaagcat
ttgttgttcagtgttactgaaccgcagtatagggtgaagccagctggcgtttctgatatc
atgtgggcagaagctatgggaaaactagagggtatggatagtacagacagagaacgctta
tggcctcagcttgttcagggtttcaaggatctttcacaccgcctcaaggtccaggatgaa
gtcattctatcagatgctgaaagattacgaattactcaaagcaatgtgaaaacgcttcaa
aggcattttcaagctgaaactctaccatggattgaaagaatgaaacaaaaagagcaaagc
cttcaaaggcgtcttttaagggtaatgagaattgttgaagcattggagggtaaaggttgt
cgattacccttaatgaaaggagaaggtgagttggctgagaagttagctgcagtaacaaga
cagctgaaaggatctggagcggaactttctaggagggtccaaagcctccttactgtgtct
cgtgttcaagcaaatacctttggtgctggtggttctctctatcttccaggatcaactaaa
atacatgaacagagtcttgcagacatgcaagaggttttacaacagcagactgaggccatt
gcaagactaggcaatgtgttgaagcgagatattagggacatggagattataatggctgaa
gacacagagatgacagaagatgtgagctaa
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