KEGG   Pistacia vera (pistachio): 116108625
Entry
116108625         CDS       T07386                                 
Name
(RefSeq) exosome complex component RRP41 homolog
  KO
K11600  exosome complex component RRP41
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116108625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvy03019]
    116108625
Messenger RNA biogenesis [BR:pvy03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116108625
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     116108625
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 116108625
NCBI-ProteinID: XP_031250732
LinkDB
Position
Unknown
AA seq 241 aa
MEYVSPEGLRLDGRRPMEMRQLCAEIGVVAKADGSAMFEMGNTKVIAAVYGPREVQNRSQ
QITDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTNLMPRSQIDIF
VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYVEDSAGGPD
VTVGILPTLDKVTLLQMDAKLPTDTFEDVMQLATEGCKAVANYIREVLLENTKQLECRRG
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaatatgtaagccctgaaggacttcgattagatggtcgccgccctatggaaatgagg
caactatgtgctgagattggtgtcgttgccaaagcagatggttctgctatgtttgagatg
ggtaacacaaaagtcattgctgctgtctatggtcctagagaggttcaaaataggagccag
caaattactgaccaagcattggtgcgctgtgagtacagcatggctaattttagtactgga
gatcgtatgagaaaaccaaagggtgacaggcgatcaacagagatatctcttgttattcgt
cagacaatggaagcatgcatattgaccaatttaatgcctcgttctcagatagatattttt
gtacaagttctacaagcagatggaggaactcgatctgcatgtattaatgctgcaacatta
gctcttgcagatgctgggattccaatgcgtgatattgttacttcctgtagtgctggatac
ctcaatagtactcctcttcttgatttgaattatgttgaagatagtgctggaggtcctgat
gtcactgtaggcattctacctacattggacaaagttactctccttcagatggatgctaag
ttaccaactgatacatttgaagatgtcatgcaacttgctactgaaggctgcaaggcagta
gcaaattatattcgagaagtactactagagaataccaagcagctggagtgtcgccggggt
tcataa

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