Pistacia vera (pistachio): 116108644
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Entry
116108644 CDS
T07386
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116108644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116108644
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116108644
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
116108644
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
116108644
NCBI-ProteinID:
XP_031250750
LinkDB
All DBs
Position
Unknown
AA seq
150 aa
AA seq
DB search
MEYVSPEGLRLDGRRPMEMRQLRAEIGVIAKADGSAMFEMGNTKVIAAVYGPREVQNRSQ
QITDQALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTNLMPRSQIDIF
VQVLQADGGTRSACIHACDISACRCWDSNA
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atggaatatgtaagccctgaaggacttcgattggatggtcgccgccctatggaaatgagg
caactacgagctgagattggtgtcattgccaaagcagatggttctgctatgtttgagatg
ggtaacacaaaagtcattgctgctgtctatggcccaagagaggttcaaaataggagccag
caaattactgaccaagcactggtgcgctgtgagtacagcatggctaattttagtactgga
gatcgtatgagaaaaccgaagggtgacaggcgatcaacagagatatctcttgttattcgt
cagacaatggaagcatgcatattgaccaatttaatgcctcgttctcagatagatattttt
gtacaagttctacaagcagatggaggaactcgatctgcatgtattcatgcttgcgacatt
agcgcttgcagatgctgggattccaatgcgtga
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integrated database retrieval system
