KEGG   Pistacia vera (pistachio): 116108726
Entry
116108726         CDS       T07386                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116108726
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvy03041]
    116108726
Spliceosome [BR:pvy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116108726
 Complex B
    116108726
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded
Other DBs
NCBI-GeneID: 116108726
NCBI-ProteinID: XP_031250809
LinkDB
Position
Unknown
AA seq 524 aa
MSGKDSRYDANGEDSHHKSSRGSDYERSRTRDQERDRHRRDYKDRSMRDDRGRDKNDDYD
RQRGRDHDRYRDYDRDKEKRHRHRSRSRSKETSRKRSGSPSRSRSPSKSRRRSGFDMAPP
VAAMLPAAAVPGQLPGAPQTTAGTVQNMLPFGTQLGALPLMPIQAMTQQATRHARRVYVG
GLPPLANEQTIATFFSQVMAAIGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMA
LDGIIFEGVAVRVRRPTDYNPTLAAALGPGQPSPHLNLAAVGLAPGAIGGAEGPDRVFVG
GLPYYFTEAQIRELLESFGTLRGFDLVKDRDTGNSKGYGFCVYQDPTVTDIACAALNGLK
MGDKTLTVRRATASSGQSKSEQDNILAQAQQHIAIQKMALQTGVMNLPGGGIAPSAFGES
PAKVLCLTEAITADVLADDEEYEEVLEDMREECSKYGTLVNVVIPRPDPNGEQFPGVGKV
FLEYYDIAGCATAKTALNGRKFGGNLVKAYYYPEDKYFNRDYSA
NT seq 1575 nt   +upstreamnt  +downstreamnt
atgtccggtaaagatagtcgatatgatgccaatggcgaagactcgcatcacaagagttct
cgggggtcagattatgagaggtccaggactagagaccaagaacgagatcgtcatcgtagg
gattataaggacagaagcatgagggatgacagaggaagggataagaatgatgattatgac
cgtcaacggggtcgtgatcatgacagataccgtgactatgatcgagacaaagaaaagagg
cataggcatagatcacgctcccgttcaaaggaaacatcaaggaagcgatctggatcaccc
tctcggtcccgttctccttcaaaaagcaggcggagaagtggttttgatatggcaccacct
gttgctgctatgctgcctgctgctgctgttccagggcaactgcctggtgctcctcaaaca
actgcaggaacagttcaaaatatgttaccttttggaactcagttgggagctcttcctttg
atgccgatccaagccatgactcaacaggctacaaggcatgctcgccgggtatatgttggt
gggcttccccccttggctaatgaacagacaattgcaacattctttagccaggttatggct
gctattgggggaaattctgctggtccaggtgatgcagtagtgaatgtttacattaatcat
gagaagaaatttgcttttgtggagatgagaactgttgaagaagcaagtaatgcaatggca
ttggacggaattatatttgagggggttgctgtaagggtaagaaggcctacggattacaac
cctacattagctgcagcacttggtcctggccaaccaagtcctcaccttaacttggcagct
gttggtctcgcaccaggggcaattggcggagcagagggtcctgatcgtgtctttgtgggt
ggattgccgtactattttactgaagcacagataagagagttgctcgagtcctttgggact
ctccgtggctttgaccttgtgaaggatagagatacagggaactctaaaggatatggtttc
tgtgtctatcaggatccaacggtgacggacattgcgtgcgcagctctgaatggcttgaaa
atgggtgataaaactttaactgttcggcgtgcaactgccagcagtgggcaatctaagtca
gaacaagataatatattagctcaggctcagcagcacattgctattcagaaaatggccttg
caaactggtgttatgaatcttcctggaggggggatagcaccttcagcatttggagaaagt
ccagctaaagtattatgtttgactgaggcaattactgctgatgttctggcggatgatgaa
gagtatgaggaagtactggaagacatgagagaagaatgcagtaaatatggaaccttggtg
aatgttgttattcctcgcccagatccaaatggagagcagtttccaggtgttggaaaggtt
ttcttggagtattatgacatagctggttgtgccactgcaaaaaccgcattaaatgggagg
aaatttggagggaatttggtgaaagcctactattacccagaagacaaatatttcaataga
gactatagtgcgtga

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