Pistacia vera (pistachio): 116108886
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Entry
116108886 CDS
T07386
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116108886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvy04131
]
116108886
Membrane trafficking [BR:
pvy04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116108886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
WD40
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_Aladin
Beta-prop_TEP1_2nd
zf_RING_Vps8
WD40_Prp19
Beta-prop_THOC3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
116108886
NCBI-ProteinID:
XP_031250984
LinkDB
All DBs
Position
Unknown
AA seq
1927 aa
AA seq
DB search
MELDIDSFLDSHPSSDSDDDSNSVPHRTLDEILNDTDSSTPPSSPPSIHHPDLSLPKSHH
RNDSISSQDSTKPPKTSSFTRLKTNESTADPLWRVPSSSSRQLPSLFGGVRSNAKPGAAL
AAAAAASRPVPTPHAAALKSRRAGSGTLQKVLDGDDHEIFSVSSNEISVSSEKLEEDDEK
MGDFQSAQVSVSEESSNLPCSKDEDTKLELMTSDADEEHLNTSSNLNTEQLVDSSSLIVE
EDLNLSKKSTIAGSEDVSDMDRNKNVTSVTGDDDSSENNVSSPPESDKDGQMEEVQILEM
ENSDNGLSSCKDDVVSTVGGGDASSISDISELVEERIGQLESEMISRRAEKKSRPSMKPL
ELAEELEKKQASTGLHWEEGAAAQPMRLEGVRRGSTTLGYFDVNANNTITQTIGSQAFRR
DHGSPQILAVHLNFIAIGMSKGVIVVVPSKYSAHHHENMDSKMVMLGLLGDRSHASVTSM
CFNQQGDLLLAGYGDGHIVVWDVQKASAAKVITGEHTAPVVHTLFLGQDSQVTRQFKAVT
GDCKGLVLLHACSVVPLLNRFSIKTQCLLDGQRTGVVLSASPLLFDESCGGALPSSHSQG
NSAATTSSIGSMMGGVVGADAGWKLFNEGSSLVEEGVVIFVTHQTALVVRLTPTLEVYAQ
LSRPDGVREGSIPYTAWKCMMPSRGSSMESTSAEAAERISLLALAWDRKVQVAKLVKSEL
KVYGKWSIDSAAVGVAWLDDQMLVVLTVTGQLYLFARDGTVIHQTSFSVDGSRGDDLIGY
HTHFINVFGNPEKSYHNCVAIRGASIYVLGPMHLVVSRLLPWKERIQVLRKAGDWMGALN
MAITLYDGQAHGVIDLPRTLDAVQEVIMPYLVELLLSYVDEVFSYISVAFCNQIEKLEQL
NDTQSRSSSVHTEIKEQFTRVGGVAVEFCVHIKRIDILFEEIFSKFVAVHHRDTFLELLE
PYILKDMLGSLPPEIMQALVEHYSSKGWLQRVEQCVLHMDISSLDFNQVVRLCRDHALYG
ALVYLFNKGLDDFRAPLEELLVVLRNCQRENAAALGYRMLVYLKYCFQGLAFPPGHGTLP
PTRLPSLRKELMQFLLEESDAQNSQAASSLSVGGLYLNLYHLLELDTEATLDVLRCAFKE
DATPLSDIASHDSADANMEADKEQNSMDKCQNMLVQNTVNALVHVLDNVISQINGPAGND
DSGSVETWPSQKDIGHLFEFIAYYVACGKANVSKSVLSQILHYLTSEKNASPSNPTHSVE
TSRKREKQLLALLEVVPETDWNASDVLHLCESAQFHQVCGLIHTIRHHYLAALDSYMKDF
DEPIHAFSFINDKLVQLTDKERAAFRSAVISRIPELVGLSREGTFFLVIDQFSNEASHIL
SELRSHPKSLFLYLKTVVEVHLYGTLNLSYLRKDDGIIVANGKRVKCHSKGLEAYMERIS
DFPKLLCSNPVHVTDDMIELYLELLCQYERESVLKFLETFDSYRVEHCLRLCQEYGIIDA
AAFLLERVGDVGSALLLTLSGLDDKFLRLETAVGSAVSRVVKGSVNMEHFSTVLNMEEVN
DVRNILHACTGLCQRNTPRLNPEESETLWFKLLDSFCRPLMGDERTSEGENDSKMLEDPL
CLQEGEEACIIKWRISKSHRGAYILRKLFSQFIKEIVEGMIGYVHLPTIMSKLLSDNGSQ
EFGDFKLTILGMLGTYSFERRILDTAKSLIEDDTFYTMSVLKRDASHGYAPRSLFCCICN
CLLTKNSSSFRIRVFNCGHATHIQCELLENESSSRGSLSGCPLCMPKKNTQRSRNKSVVA
ENGLVSKFSSRTQPASGTTLHLHESDTFENPYGIQLLSRFDILNNLQKDQRLAQIENMPQ
LRLAPPAIYHEKVKKGTDLLTGESSSALAKIEKPSKNSQIRDLKLKGSSLRFPLKSSIFG
KERTSRR
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgacattgactcctttcttgactcccacccctcctccgattccgacgacgac
tctaactcagtccctcaccgtaccctagacgaaattctcaacgacaccgattcctccacc
ccaccatcatcaccgccgtctattcaccacccagatctctccctccccaaatcacaccac
cgaaatgattcaatttcttcacaagattccacaaaaccaccaaaaactagttccttcact
cgcctcaaaactaacgaatcaacagctgatcctttatggagggttccttcttcatcttct
aggcaattgccatccttgtttggtggagtgcgttccaatgcaaaaccgggggcggcgctt
gcggctgcagccgccgcctcccgcccggtgcccactccacatgctgccgccttaaagtcg
cggagagcaggaagtgggacgctccagaaggttctggatggtgatgatcacgaaattttt
tctgtatcttccaatgaaattagcgtgtccagcgagaaattggaggaagatgacgagaaa
atgggtgattttcaatctgctcaagtaagtgttagcgaagaatcatcaaatttgccttgc
agtaaagatgaagatactaaattagaattaatgactagtgatgctgatgaagaacattta
aataccagttctaatttgaataccgaacaactggttgattcctcgtcacttattgttgag
gaggatttgaatttgagtaaaaaatctacaattgcaggttcagaagatgtttctgatatg
gatagaaataaaaatgttacctctgttactggtgatgatgattctagtgaaaataatgtt
tcttctccacctgagtctgataaggatggacaaatggaggaggttcagatattggagatg
gagaattcggacaatggtctgtctagctgtaaagatgatgtggtgagcactgttggtggt
ggtgatgccagttctataagtgacatttcggagcttgtagaagaaagaattgggcagttg
gagagcgagatgattagtagaagagctgaaaagaaatcacggccttccatgaagcctctt
gaattggcagaggaactcgaaaagaagcaggcatctactggtctgcattgggaggagggt
gcggctgctcaacccatgaggcttgaaggtgtcaggagagggtcaaccacgttgggatat
tttgatgttaacgccaataacactattacgcagactattggatcccaggcatttaggcgt
gatcatggttccccacaaatcttggcggtgcatcttaattttattgctattggaatgtcc
aaaggggtcattgttgttgtgcccagtaaatactctgctcatcatcatgaaaatatggat
tcaaagatggttatgcttggtttgcttggcgatcgatctcatgcctcagtgacttccatg
tgcttcaaccagcaaggtgatctgctcttagctggttatggtgatggtcatattgtagtt
tgggatgtacagaaggcatctgcagcgaaagttattactggagagcacactgcaccggta
gtacatacattatttttagggcaggattctcaggtcactcgtcaatttaaagcagttacc
ggtgattgtaagggcctggttctgttacatgcttgctcagtggttcccttgcttaatagg
ttctccattaaaactcagtgtctccttgatggacaaagaacgggtgtagtactatcagct
tctcctcttcttttcgatgaatcttgtggaggtgctttgccatcctctcactctcaggga
aactctgcggctacaaccagcagtattggtagcatgatgggaggtgtcgttggggcagat
gcaggttggaaactcttcaatgaggggtcctctttggttgaagaaggtgtggtcatattt
gtcacccatcaaactgcactggtggtaaggctcactcccactttagaagtatatgctcaa
ctttccaggccggatggggttcgggaaggttccatcccgtacactgcttggaaatgtatg
atgccatctcgtggttcttcaatggaaagtacttctgcagaagcagcagagagaatatcg
ttgcttgcacttgcttgggatcggaaagttcaggttgcaaagttggtcaaatcagagctt
aaagtatatggaaagtggtccattgacagtgcagctgtgggtgttgcttggttggatgat
cagatgcttgtggttcttacagtgacaggacagctctatctgtttgctagagacggaacg
gtaattcaccaaacaagtttttctgtagatggttccagaggagatgatctaattggatat
catacccacttcattaatgtttttgggaaccctgagaaatcctatcacaactgtgtggct
ataagaggagcttctatatatgtacttggacctatgcatcttgtagtttcccgccttctt
ccatggaaggagcggattcaggttctccgaaaagcaggtgactggatgggtgccttgaac
atggctattacgctgtatgatggtcaagctcatggtgttattgaccttcctagaaccctg
gatgctgtacaggaggtcataatgccttatttggttgagttgttactatcctatgtagat
gaagtattttcttatatatcagtggcattttgcaaccaaatcgaaaaactggaacaacta
aatgatacacaaagtagaagcagttctgtgcacactgaaataaaagagcagttcacccgt
gttggtggagtagcagttgagttctgtgtccatatcaaaaggattgacatcctttttgaa
gaaattttctctaaatttgtggctgttcatcacagagatacatttctggagcttttggag
ccatatattttgaaggacatgcttggatctctacctcctgagattatgcaagcactggta
gagcattatagcagcaaagggtggttacagcgagttgaacaatgtgtccttcatatggac
atttcttctttagacttcaatcaggttgtcaggttatgccgggatcatgcgctgtacggt
gctttggtgtatcttttcaacaaaggattggatgattttcgggctcctttggaggagctg
ttagtagttttacgaaattgtcaaagagagaatgctgctgcccttgggtacaggatgctt
gtgtatctgaagtactgctttcaaggtcttgcttttccaccaggacatggaactcttcct
cccacacgtttgccatctcttagaaaagaactgatgcagtttttattagaggaatccgat
gctcagaattcacaagcagcttcaagcttatctgttggaggattatatctgaacctgtat
catctcttggaattagatactgaagcaactttagatgttctgagatgtgctttcaaagaa
gatgcaactccactatctgacattgcttcacatgattcagctgacgcaaatatggaggct
gacaaggaacagaactcaatggataaatgtcagaatatgttggttcagaatactgtaaat
gctcttgttcatgttcttgacaatgttatctcccaaataaatgggcctgctggaaatgat
gatagtggatcagttgaaacatggccttcacagaaagacataggtcatctgtttgagttc
attgcatactatgttgcatgtggaaaagctaatgtctcaaaaagtgtattgagtcagatt
ttgcactacttgacatcagaaaagaatgcatcaccaagtaatcccacacatagtgttgaa
acttctagaaaaagagaaaagcagctgctagccctactggaagtagtgcctgagactgat
tggaatgcatctgatgtgttgcatttatgtgaaagtgcacagtttcaccaggtttgtggc
ttaattcataccatcagacatcattatcttgctgctctagatagctatatgaaagatttt
gatgaaccgattcatgccttctctttcatcaatgataaattagttcagctgaccgacaaa
gaacgtgctgctttccgttcagcagtcatctctcggattccagagctggttggcttaagc
cgggagggcacgttcttcttagtcattgaccaattcagtaatgaagcttcacatatcctc
tctgaacttcgttcacatccaaaaagtcttttcctttatttgaagacagttgtagaggtt
cacttatatggaaccctgaacttatcctatttaagaaaagatgatggtataattgttgct
aatggaaaaagggtgaagtgtcattcgaaaggattggaggcttacatggaaagaatctct
gatttccctaaattgctgtgcagtaaccctgttcatgttactgatgatatgattgagctt
tacttggagttattatgtcagtatgaacgtgaatcagttctcaagtttctggaaactttt
gatagctatcgagtggaacactgtttacgcctgtgccaggaatatgggatcatagatgct
gctgcatttttattggaaagggttggtgatgttggaagtgctcttttacttacactttct
gggcttgatgataaatttcttaggcttgaaactgctgtgggaagtgcagtttctagggtg
gttaagggatcagtcaacatggagcatttcagcacagttttaaatatggaggaggtgaat
gacgtacgcaatatattgcacgcctgtactgggttgtgtcagcgaaacactccccgtttg
aatcctgaggagtcagaaacgctctggtttaaattgcttgattcgttttgtcggcctctt
atgggtgatgaaaggacatctgaaggagaaaatgattcaaaaatgctggaggacccattg
tgcttgcaagagggtgaagaagcgtgtattatcaagtggagaatttcaaagtcccatagg
ggtgcgtatatcttgagaaaattgttctcgcagtttatcaaagagattgttgaaggaatg
ataggatatgttcatcttccaaccataatgtcaaaactcctctctgataatggtagccag
gaatttggtgactttaaacttaccatacttgggatgctgggaacttatagttttgaaaga
agaattctggatactgccaagtccttgatagaggatgatacattctataccatgagcgta
ctcaagagggatgcctctcatggctacgcccctcggagtttattttgttgtatctgtaac
tgtcttctcacaaagaattcttctagtttccgcattcgagtgtttaattgtggtcatgca
actcatattcaatgcgaacttttggaaaatgaatcatcaagtagagggtccttatctgga
tgccctctttgtatgcctaagaagaatactcagaggtctagaaacaaatcagttgttgcc
gagaatggtctggtgagtaagttttcatcaagaacccagccagcatcaggaactacacta
cacttgcatgaaagtgatacatttgagaacccctatggaattcagctattatcacggttt
gatatcttaaacaatcttcaaaaggaccagagattagcgcagatagaaaacatgcctcag
ctaaggcttgctccaccagctatttatcatgaaaaggtgaaaaaaggaactgatctttta
accggagaaagtagcagtgctcttgcaaaaatagaaaaaccaagtaaaaatagtcaaatc
agggacctaaaattgaagggatcttctcttcggttccctctaaagtcaagtatatttggc
aaggaaaggacaagcaggcggtga
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integrated database retrieval system
