KEGG   Pistacia vera (pistachio): 116108936
Entry
116108936         CDS       T07386                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116108936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvy03019]
    116108936
   03041 Spliceosome [BR:pvy03041]
    116108936
Messenger RNA biogenesis [BR:pvy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     116108936
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     116108936
Spliceosome [BR:pvy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    116108936
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 116108936
NCBI-ProteinID: XP_031251034
LinkDB
Position
Unknown
AA seq 488 aa
MAKKRKSQEEEPNHEPKTLKSSSSSDEESESEEADEVEEQKESPSSSSSMAKKRKSQEEE
PNHEPKTLKSSSSSDEESESEEADEVEEQKESPSSSSSSSSEEEESEGEEDDDDDEEEEE
DDDDDEHSKLENVKKLLEPFSKDQLIAILKEATQSNPSITAEIISSADSDPVHRKIFVHG
LGWDATNETLMAALKLFGPIEECNVVTDKTTGRSKGYGFVLFKTRAAARKALKEPQKKIG
NRMAACQLASTGPVQNQNQPGSEVSARKLYVANVGPQISPEKLSAFFTKFGEIEDGPLGF
DKMTGKFRGFAIIVYKTLEGIKKALEEPVKIFDGAKLLCSIAVEGRSAKNNNNASSGPTP
VATGVNAAIMPGLTVGFNPGAVLLGQNPAALGVLNPVLGVGAGAFAGGVTQPLNNVGNAA
ATMGLNPGFGVQQGINGMNPSMMGGYGSQATFQGLGAFQNSQVGQPSASAIGTAAARSQT
GNAPFVGR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcaaaaaagcgaaagtcacaagaagaagagccgaaccatgaacccaaaaccctaaaa
tcatcctcatcttccgacgaagaatcagagtcagaagaagccgatgaagtagaagaacag
aaggaatcaccatcatcgtcgtcgtcaatggcaaaaaagcgaaagtcacaagaagaagag
ccgaaccatgaacccaaaaccctaaaatcatcctcatcttccgacgaagaatcagagtca
gaagaagctgatgaagtagaagaacagaaggaatcaccatcatcgtcgtcgtcgtcatca
tcagaggaagaagaatcagaaggagaagaagacgacgatgacgacgaagaagaagaagaa
gatgatgatgatgatgagcactcgaagctggagaacgtaaagaaacttttagaacccttc
agcaaggaccagcttatcgcgattctcaaagaagccactcaatctaacccttcaattacc
gccgaaatcatctcctccgccgactcggaccctgtccaccgcaagatcttcgtccacggc
cttggctgggatgccactaacgaaactctaatggctgctctcaaactcttcggcccaatc
gaggaatgcaatgtcgtcacagataaaaccaccggccgttctaaaggctacggctttgtc
cttttcaagacacgagccgccgcgcgtaaggccttgaaagagccgcaaaagaagatagga
aaccgaatggccgcctgccagctggcgtccaccggacctgttcagaatcaaaaccagccg
ggttctgaggtgagtgctcggaagttgtatgtggcgaatgtgggaccacagattagcccg
gagaagctcagtgcgtttttcacgaaatttggggagattgaggatgggccattggggttt
gataaaatgacagggaagtttagaggttttgctataattgtgtacaagacattggaggga
ataaagaaggctttggaggaaccagtgaaaatttttgatggtgctaagttgttgtgctct
attgccgttgaaggccgcagtgctaagaataataataatgcttcatcaggtccgacacct
gtggctacaggtgttaatgcggcgataatgccaggtttaacagtggggttcaatcctggt
gctgttttgttggggcagaatccggctgctttgggggttttgaaccctgttttgggtgtt
ggagcaggcgcatttgctggtggggttacgcagcccttgaataatgttgggaatgcagct
gcaacgatgggattgaatccagggtttggtgtgcaacagggtattaatggtatgaatcca
agtatgatgggtggttatggttctcaggctactttccagggattgggagcttttcagaat
tcccaagtgggtcagccttcggcatctgcaatcggaactgcggcagctaggtctcaaact
ggaaatgcaccttttgtcgggcgctag

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