Pistacia vera (pistachio): 116109293
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Entry
116109293 CDS
T07386
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvy03016
]
116109293
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
116109293
Transfer RNA biogenesis [BR:
pvy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
116109293
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-GeneID:
116109293
NCBI-ProteinID:
XP_031251387
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MIMAVRVVNTCSIVRSTTSPPVAAFQCRFYHFRTLQLRCHSKSGFRFPIFSSEQQFLSHA
GFRSCSVHSLVDSVMKELKTMRKRKRVSAKVGLSGGELLVKKLENQVLQKGLLLEFKKDS
DRILLAVAQRPDGKKNWMVSDQNGVSCSIKPQQITFIVPGVENFDHSEISQFLQKAQDNL
DPALLEFAWVELLEKNKSVTAEELAEMTFGSAEPLESYCAHLLLSKDEIYFSVLATKGSR
SIYAPRSTAQVEELLRRKLAKEAAEKELQEFVQQLMSAKAMPAHAKPLKSSWKVEEKVQY
KIESLEAYAIDACKDDDQKKTAGIILKAMGLAKTASSAVNLLIDIGYFPVHVNLEVLKFN
IHTDHSEEIISAAESVLVDSPDEDELNRKDLTHLKVYAIDVDEADELDDALSATRLQDGR
IKVYIHVADPTRYVQPGSMLDKDAMRRGTSVFLPTATYPMFPDKLAMQGMSLKQGEVCNA
VTVSVVLHSDGGIAEYSVENSIIKPTYMLTYESATELLHLNLEEERELRLLSEAAALRLQ
WRRRQGAVDTVTLETRIKVSNPEDPEPLINLYVEDQAHPAMRLVSEMMILCGETIATYGS
CNNIPLPYRGQPQSNIDVSAFAHLPEGPVRSSAIVKIMRAAEIDFRKPIRHGVLGLPGYV
QFTSPIRRYLDLLAHYQVKAFLRGESPPLSCGQLEGMASIVNMHTRVARRLSSSSLRYWI
IEFLRRQPKDKRYSALVLRFIKDRTAALLLVEVGFQASASVSVGTQIGDEIEVQVEEAHP
RDDVVYLKEAIR
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgattatggccgttagagtggttaacacttgttccatcgttcggtccactacttctcct
cctgtcgctgcgtttcaatgccgattttaccatttccggaccttgcagcttcgctgtcac
tccaaatcagggttccggttcccgatattttcgtccgagcaacagtttcttagccatgcc
ggttttcgcagctgttccgttcatagtcttgttgacagtgtcatgaaagagctcaaaacc
atgcgtaaacgcaaaagagtttccgccaaggtgggtttgtcaggtggagagcttcttgta
aagaagcttgaaaaccaggtactgcagaaagggttactgctggagttcaagaaagattct
gaccgaatattgctggcagttgcacagagacctgatgggaaaaagaactggatggtgtct
gatcagaatggtgtctcgtgctccattaaaccacaacaaattacatttatcgtcccaggt
gttgaaaactttgatcattcggagatttcacaatttctgcagaaagctcaggataacttg
gatccagcacttcttgagtttgcttgggttgagcttcttgaaaagaataagtcagtcact
gctgaagaactagcggagatgacttttggaagtgcggagcctcttgaaagctattgtgcc
catcttctgctttcaaaagatgaaatctatttcagtgtgcttgcaactaaaggttctcgc
tcaatttatgcacctcgatctactgcacaggtagaagaacttttacgtaggaagcttgca
aaggaggctgcagagaaagaacttcaggagtttgtgcaacagcttatgtctgctaaggca
atgcctgctcatgctaaacctctcaaatcttcgtggaaggttgaagagaaagtccaatac
aaaattgagtctcttgaagcatatgctatcgatgcatgcaaagatgatgatcaaaagaaa
actgccgggattatccttaaggcaatgggactagcaaaaacagcatcctcagcagtaaac
ctcctcatagatattgggtattttcctgtacatgtcaatctggaagttttgaagttcaac
attcacactgatcattctgaagagattatatcagctgctgaaagtgttctggtagattca
cctgatgaagacgagcttaataggaaagatcttactcatctaaaagtttatgccattgat
gttgatgaagccgatgagctcgatgatgctctgagtgcaacaaggttgcaggatggccgg
attaaagtgtatatacatgttgctgatccaactagatatgttcagcctgggagtatgttg
gacaaggatgcaatgagaagaggaacttctgttttcttgcccactgccacttatcccatg
tttccagataaacttgccatgcagggaatgagtttgaaacaaggagaggtttgcaatgct
gtgacagtatctgttgttctgcattctgatggcggcattgcagagtactccgtggaaaac
tcaatcattaaaccaacctacatgctgacctatgaaagtgcaactgaactgctccatcta
aatctagaggaggagagggaactcaggctcctatcagaggcagcagctctccggttacaa
tggcgtcgcagacagggtgcagttgatactgtcacattagaaactcgtataaaggtttcc
aatcctgaagatccagaaccattaattaatctatatgtcgaagaccaggctcatcctgca
atgcgacttgtttctgagatgatgattctctgtggggaaactatagccacttatggttca
tgcaataacattcctttaccctacagaggacagcctcaatcaaatatcgatgtgtcggca
tttgcacatcttccagaagggcctgtccggagctctgccattgttaaaataatgcgagct
gctgaaattgatttcaggaaaccaatacgacacggagttctggggcttcctggttatgtt
cagttcacatctcctattcgtaggtatttggacctacttgctcattatcaggtcaaagca
tttcttagaggcgaatctcctcctctctcttgtggccaacttgaagggatggcatctata
gtgaatatgcatactagagtggcaaggaggctcagcagcagtagtcttcggtattggata
atagaatttctgagaaggcaaccaaaagataaacggtacagtgctttggtccttagattt
atcaaagatcggactgcagccttactattggttgaggtgggatttcaagcatctgcatcg
gtgtctgtgggaacacaaattggggatgagatagaagttcaggtggaagaagcccatcca
cgagatgatgttgtttatctgaaggaggctattaggtag
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