Pistacia vera (pistachio): 116109484
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Entry
116109484 CDS
T07386
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvy03036
]
116109484
Chromosome and associated proteins [BR:
pvy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116109484
Meiosis-specific proteins
Cohesin complex and associated proteins
116109484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_29
AAA_21
AAA_23
Laminin_II
ABC_tran
DUF1664
AAA_15
AAA_27
DUF3450
DUF2935
Sec10_N
Motif
Other DBs
NCBI-GeneID:
116109484
NCBI-ProteinID:
XP_031251556
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MPSLLSPGRIHRLELENFKSYKGLQTIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAYDDKEKEQKGRRAFVRLVYLLGNGLELQFTRIITSAGASEYRIDGKV
VNWDEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSDELRRNYEVL
EEEKARAEEKSALVYQKKKTIVLERKQKKEQKEEAEKHLRLQDQLKSLKKEHFLWQLYTI
EQDITKMSDDLEADKRSRQDILQDLDHLNDKKREKNKELHRYSKEVALCEKKISDKRSRL
DKYQPLLLKFNEERSRINSKIKSTRKELDRKREERRKHADEIEELQKGVQDLTAKLDDLN
EKSRDAAGKLPLLDSQLTEYFRIKEDAGMKTAKLRDEKEVLDRQQHADIEAQKNLEENFQ
QLSNREHELNAQEEQMRMRQKNVIETSARHKEELMALKKELRLMQDKHRDCRNKYDNLKT
KIGEIENQLRELKADRHETERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGKFMDAVVVEDESTGKECIKYLKEQRLPPQTFIPLQSVRVKPIVERLRTLGGTAKLIF
DVIQFDPSLEKAILFAVGNTLVCDDLDEAKALSWSGERFRVVTTDGILLTKSGTMTGGTT
GGMEARSKQWDDKKIEGLKKNKEQFESELEELGSIREMQLRESEMSGKITGLEKKIQYAE
IEKRSIDDKLANLRKEKRNIKEEIGRINPDLRKLKDVIDRRTTEIKKLEKRINEIVDRLY
KDFSRSVGVANIREYEENQLKAAQNVAEERLNLSSQLSKLKYQLEYEQKRDVESRISRLE
SSLVTFENDLKEIQNKEADVKSSTEKATSEINRWKEEVREWKSKLEECEKEIQEWEKQAS
AATTSLSKLNRQINSKETQIEQLMSRRQEIVETCELEHIILPTIPDPMETDSSIPGPVFD
FSQLSRSLLQNKRPSERERLEAEFKQKMDALITEIERTAPNLKALDQYEVLLEKEKAVSE
EFEAARKEEKLAAENYNSIKQKRYELFMEAFNYISSNIDRIYKQLTKSNTHPLGGMAYLN
LENEDDPYLHGIKYTVMPPTKRFREMDQLSGGEKTVAALTLLFSIHSYKPSPFFILDEVD
AALDNLNVSKVAGYIRSKSCEGGKSNQDDGEGSGFQSIVISLKDSFYDKAEALVGVYRDS
DRSCSRTLTFDLTKYRES
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccctccttactctcaccaggcagaatccaccgtttggaactcgaaaacttcaagtcc
tacaagggactccaaactatcggcccgttctccgacttcaccgcaataatcgggccgaat
ggagctgggaaatccaacctaatggatgccataagcttcgttctcggtgtccgtactggc
cagctccgtggggctcagttgaaagatctcatttatgcttacgatgataaagagaaggag
cagaaaggtaggagagcgtttgtgagactggtgtatctgctgggaaacggtttggagctc
cagtttactagaattattacgagtgcaggtgcaagcgagtatcgaattgatggtaaagtc
gttaactgggatgagtataatggcaagttgaggtcgcttgggattcttgttaaagccaga
aattttctcgtcttccagggtgatgtggagtccattgcttcaaagaatcccaaggaactt
actggacttcttgagcagatttctgggtctgatgaactcaggagaaattatgaggttctg
gaagaggaaaaagcgagagctgaagaaaagtcagctcttgtttatcagaaaaagaaaaca
atagtgttggagaggaagcagaagaaagaacaaaaggaagaagcagagaagcatcttcgc
ctgcaagatcaactgaaatctttgaagaaagaacactttttatggcaattgtatactata
gaacaagatattaccaagatgagtgatgatcttgaagctgataagagaagccgtcaagat
atattgcaagatttagatcatctgaatgataaaaaacgtgaaaagaataaggaactacac
agatattcgaaagaggttgcactgtgtgagaagaagatttctgacaaaagaagtagactc
gataaatatcaacctctgcttctcaaattcaatgaagaaagatctcgcataaattcaaaa
atcaagagtactcgaaaggaacttgatagaaaaagagaagagagaaggaaacatgctgat
gaaatagaagagctgcagaaaggagtacaagatctgacagcaaaactagatgatttaaat
gaaaaaagtcgagatgctgctgggaaacttccattgcttgacagtcaacttacagaatat
tttcgaattaaagaggatgctggaatgaaaactgcaaagctaagagatgagaaagaggtt
ctggataggcaacaacatgctgatattgaagcgcaaaagaatttggaagaaaattttcaa
caattgagtaatagggagcatgaactgaatgcgcaggaggagcaaatgcgaatgcgacag
aaaaatgttatagagacttctgctagacataaagaggagctcatggcgctgaagaaggag
ctgcgactgatgcaagataaacaccgtgattgcaggaataaatatgataatctgaagact
aaaattggtgaaatagaaaatcaattacgtgaactgaaggctgataggcatgaaactgag
agggatgctaagctgtctcaagctgtggaaactctcaagcgcctatttcaaggagttcac
ggacgtatgactgatctgtgtaggccaacccagaagaagtacaaccttgctgttactgta
gccatgggtaaatttatggatgcagtagtggtcgaggatgagagtacaggaaaggaatgc
atcaagtatttgaaagagcaaaggcttcctccccaaacgtttataccactgcagtcagtg
cgtgttaagccaatcgttgagaggctacggactttaggtggtactgcaaagctgatcttt
gatgttatccaattcgatccgtcattggagaaggcaattctttttgctgttgggaatact
ctagtttgtgatgaccttgatgaagccaaggctcttagctggagtggggagaggtttagg
gttgtaactactgatggaattctgctcacaaagtctgggacaatgactggtggtacaact
ggtgggatggaagcaaggtcgaaacagtgggatgataaaaagattgaaggactgaaaaaa
aacaaagagcagtttgaatcagagttggaagaacttggttcaattagggagatgcagcta
agagagtctgaaatgtctgggaaaattactggactcgaaaagaagattcagtatgctgaa
attgagaagcggagcattgatgacaaacttgccaacttgaggaaggaaaagcgtaatatc
aaggaagaaattggccggataaatcctgatcttcgtaagttaaaggatgtaattgatagg
agaaccacagaaatcaagaagctggaaaagaggattaatgagattgttgatcgtctctac
aaagatttcagtcggtctgttggggttgcaaatatccgtgagtatgaagagaaccagctg
aaggctgcccaaaatgttgctgaagaaaggcttaacttgagtagtcagctgtctaagttg
aagtaccagttggagtatgagcagaagcgtgatgtggaatcacgaatttcaaggctggaa
tcttctcttgttacctttgaaaatgacttgaaagagatccagaacaaagaagctgatgtc
aagtcatcaactgagaaagctactagtgagatcaatcgttggaaggaagaagtccgtgag
tggaaatccaagttggaagagtgtgagaaggagatccaggaatgggagaagcaggcttct
gctgctactacaagcttatccaagctgaaccgtcagataaattctaaggagacacagatt
gagcagctgatgtcacggaggcaggaaatagtggagacttgtgaactagaacacataatt
cttcctactattccagaccccatggaaactgattcttcaataccaggccctgtttttgat
tttagtcagttaagtaggtcgcttctgcagaataagagaccttctgagcgtgagaggctt
gaggctgaattcaagcaaaaaatggatgccctaatcacagaaattgaaagaactgctcca
aatttgaaggcactggaccaatatgaggttctgttagagaaggaaaaggctgtaagtgaa
gagtttgaagctgccagaaaggaggagaagctagcagctgaaaattacaattcaattaag
cagaagagatatgaattgtttatggaagctttcaactatatttctagtaatatcgacagg
atatacaaacaactaacgaagagcaatacacacccattgggtgggatggcatatttgaac
ttagaaaatgaggatgatccttatttgcatggcatcaaatacactgttatgccaccaaca
aagcgctttcgtgaaatggatcagctctctggtggggagaagacagttgcagcacttaca
ttactcttctctatccacagctacaagccttcgccattttttatattggatgaagttgat
gcagctttggataatttaaacgtttctaaagtagctggatacatccgttcaaaatcatgt
gaaggagggaagagcaatcaggatgatggtgaaggcagtggttttcagagtatagtgata
tcattgaaagatagcttttatgacaaggctgaagctttggttggggtttacagggactca
gacagaagctgttcgaggaccctgacatttgacctgaccaaataccgggaatcttag
DBGET
integrated database retrieval system
