Pistacia vera (pistachio): 116109499
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Entry
116109499 CDS
T07386
Name
(RefSeq) pre-mRNA-splicing factor SLU7-A
KO
K12819
pre-mRNA-processing factor SLU7
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116109499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvy03041
]
116109499
Spliceosome [BR:
pvy03041
]
Complex C
Other components
Step II factors
116109499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Tudor_3
Motif
Other DBs
NCBI-GeneID:
116109499
NCBI-ProteinID:
XP_031251574
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MATASVAFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNSEKP
SLKHQRKWKSDPNYTKSWYDRGAKIFHAEKYRKGACANCGAMTHDAKSCMERPRKMGARW
TNINIAPDEKIETFELDYDGKRDRWNGYDTSTYARIVERYEARDEARRKFLKEQQFKKLE
EKNNNQSSEDGLSDGDDDDDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYEGDNQYRNSGQALEFKELNI
HSWEAFDKGQDIHMQAAPSQAELLYKNYKVIKEKLKSKTKDTIMEKYGNAAAEEELPREL
LLGQSEREVEYDRTGRIIKGQETALPKSKYEEDVYINNHTSVWGSWWKDHQWGYKCCKQV
IRNSYCTGAAGIEAAEAATDLMKANIARKEANEEHVPVEEKRHVTWGTDVPEDLVLDEKL
LADALKKEDERRREEKDERKRKYNVRWNDEVTPEDMEAYRMKKVHHDDPMRDFLH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcatctgtggcatttaagtctagggaggatcaccggaagcaaattgaatta
gaagaagcgcgtaaagctgggcttgctcctgccgaggttgatgaggatggaaaagaaatc
aatcctcatatacctcagtacatgtcctcggcaccatggtatctcaattctgaaaagccg
agtttaaaacatcaaagaaagtggaagtccgaccccaattacacaaagtcatggtatgac
agaggcgcgaaaattttccatgctgaaaaataccgcaaaggtgcatgcgctaactgtgga
gcaatgacacatgatgccaagtcatgcatggaacgtcctcgaaaaatgggagcaaggtgg
acaaacataaacattgcacctgatgaaaaaattgagacctttgagcttgattacgatggg
aagagagaccgttggaatggctatgatacatcaacctatgcccgaattgttgaaagatat
gaagccagggatgaagcacggaggaaatttttgaaggagcagcaatttaagaaattagag
gagaaaaataataaccagagtagtgaggatgggctcagtgatggggacgatgatgacgat
gatttaagggtagatgaagccaaagttgatgagagcaagcaaatggattttgcaaaggtt
gaaaaacgtgtacgtacaacaggtggtgggagcacaggaactgtaaggaatttgcgaatt
cgggaggatacagcaaagtacctcttaaatctggatgttaattcggcacactatgatcct
aaaactcgatccatgcgtgaagatccacttcctgatgcagatccaaatgagaaattttat
gaaggggataaccaatacagaaatagtggtcaagctttggagtttaaggagctcaacatc
cattcttgggaagcatttgataagggacaagacattcacatgcaagctgctccttcccaa
gctgaattgctgtataagaattataaggtcataaaggagaagttgaagtctaaaacaaag
gacacaattatggaaaaatatggcaatgcagctgctgaggaagaacttccaagagagctg
cttttgggacaaagtgaaagagaagttgaatatgatcgtactggccggataataaaggga
caggagacagcacttccgaagagcaaatatgaagaggacgtttatattaataatcacact
agtgtttggggttcgtggtggaaggatcatcagtgggggtataaatgctgcaagcaagtg
atacgtaacagctattgcacaggtgcagctggaattgaggctgcagaggctgcaacagac
ctcatgaaggccaatattgcccgtaaagaggccaatgaagagcatgtaccagtggaggag
aaaaggcatgtcacttgggggactgatgttccagaggatttggttttggatgagaaatta
cttgctgatgcactcaagaaggaggacgaaaggaggagagaggagaaagatgagagaaag
aggaaatacaatgtcagatggaatgatgaggttactcccgaggatatggaggcatatagg
atgaagaaagtgcatcatgatgatcccatgagggatttcctgcactaa
DBGET
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