Pistacia vera (pistachio): 116109592
Help
Entry
116109592 CDS
T07386
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116109592
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
90S particles
Other 90S particles
116109592
Pre-60S particles
Other pre-60S particles
116109592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
MurD_N
MRB1590_C
DUF3375
Motif
Other DBs
NCBI-GeneID:
116109592
NCBI-ProteinID:
XP_031251683
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MIAAVSWVPKGASKAVPDEAQLPSKEEIEEMIKSGGLEEESEHGRSEEDGEDTDIEDVEQ
TDEVSQALAVADALGKTSKKNSEAKLDDIADGLKELDMDHYDDEDEGVELFSRGIGDLYY
PSNQMDPHLKDKDDEDSEDLEDLVINANDAVIVCARNEDDVSHLEVHVYEESNDGDVNLY
VHHHIIIPAFPLCMAWLDCPLKGGEKGNFMAVGSMEPSIEIWDLDIIEEVQPCLILGGID
EEKKMKKKKKKKGKKSSFEYKEGSHTDSVLGLAWNKEFRNILASASADKTVKIWDVVEGK
CSFTLEHHTDKVQAVAWNHYAPQVLLSGSFDRSIVMKDARISTHSGFKWSITADVESLAW
DPHNEHSFVVSLEDGTVKGFDIRIAKSDPASESQPSFTLHAHDKAVCSVSYNPLAPNLLA
TGSTDKMVKLWDLSNNQPSCVASRNPKAGSIFSVSFSGDSPFLLAIGGSKGNLEVWDTLS
DAGVSQRFSKYSKSNRAET
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatagcggcagtatcatgggtgccgaagggcgcatcaaaggccgtgcctgatgaagct
caactaccttcaaaagaagaaattgaggagatgataaaaagtggtggtttagaagaggaa
agtgaacatggtcgtagtgaggaggatggtgaagacacggatattgaggatgtcgagcag
actgatgaagtctcacaagctttagctgtagcagatgcacttggcaaaacttccaaaaag
aattcagaagccaaattggatgatatagctgatggcttgaaggaacttgacatggaccat
tatgatgatgaggatgaaggagttgagctttttagcagggggattggggacctttactac
ccaagtaatcaaatggatccacacctgaaggataaagatgatgaggactcagaagacctt
gaggatctggtcattaatgcaaatgatgcagttatagtttgtgcacgtaatgaggatgat
gtcagtcatcttgaggtccatgtatacgaggaatcaaatgatggtgatgtaaacttgtat
gttcaccatcatattatcattccagcatttcctctttgcatggcttggcttgattgccca
cttaaaggaggagaaaaagggaattttatggctgttggctctatggaaccttctattgag
atatgggaccttgacattattgaagaagtacaaccatgtctcatactaggtggcattgat
gaggagaagaagatgaagaagaagaagaagaagaaaggcaagaagtcgtcctttgaatac
aaagaagggagtcatactgattcagtgctaggtcttgcttggaacaaagagttcaggaat
atcctagccagtgcaagtgctgacaaaactgttaagatttgggatgtggttgaaggaaaa
tgtagttttaccttggagcatcatacagataaggttcaagcagttgcatggaatcattat
gcaccccaagttcttcttagtggatcttttgatcgttcaattgtcatgaaggatgcaagg
atatctacgcattctggtttcaagtggtcaattacagctgatgtagaaagcttggcatgg
gatccacacaacgagcattcatttgtggtgagtcttgaagatggtacagtaaaaggtttt
gatatccggatcgccaaatcagatcctgcttcagaatcacaaccaagttttactctgcat
gctcatgacaaggctgtttgtagcgtctcctataatccgttagcacccaaccttcttgcg
actggatctactgataaaatggtaaaactttgggatttgtcaaacaaccaaccttcatgt
gttgcatccaggaatcctaaagcaggatctattttttctgtttccttctcgggggatagt
ccatttttgctggcaattggagggtccaaaggaaatttggaggtatgggatactttatcc
gatgccggggtgtcgcaaagatttagtaaatacagcaagtccaacagagctgagacatga
DBGET
integrated database retrieval system
