Pistacia vera (pistachio): 116109790
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Entry
116109790 CDS
T07386
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
pvy
Pistacia vera (pistachio)
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvy03009
]
116109790
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116109790
Ribosome biogenesis [BR:
pvy03009
]
Eukaryotic type
Pre-60S particles
Helicases
116109790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GDH_HM1
Cas3-like_C_2
AAA_22
CcdA
Motif
Other DBs
NCBI-GeneID:
116109790
NCBI-ProteinID:
XP_031251878
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MAANSPPLSSESTTKKKANKIKRTQHHQELEKFDSLKWNPSLSADDPDPFSFLVGSSELD
GGFLSLEEIDEADYMLQIPKSEKGKPEKKLKLKKQKQKDTDEDLDGVVEDGIGHIVEEEK
NEKKKQKKKKKKKGKKAKKTEESVNVSNGQYNVEEELVDETEVPPEYSAWIELRLHPLLM
KSIYRLGFKEPTPVQKACIPAASHQGKDVIGAAETGSGKTLAFGLPIIQRLLEEREKAAK
MLEEKGEEAEKYAPKGLLRALILTPTRELALQVTDHLKEVAKGINVRVVPIVGGMSTEKQ
ERLLKARPEVIVGTPGRLWEFMSGGEPHLVELHTLSFFVLDEADRMIENGHFRELQSIID
MLPMTSGSVEGQAQQTQNCMTVSSLQRKKRQTLVFSATIALSADFRKKLKHGSIKSKQSS
IDGLNSIEALSERAGMRPNVAIVDLTNASILANKLEESFIECKEEDKDAYLYYILSVHGQ
GRTIVFCTSIAALRHISSILRILGVTVWTLHAQMQQRARLKAIDRFRANEHGILVATDVA
ARGLDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIAIITPNDTSKFVSLCKSFS
KESFQRFPLENSYMKEVMKRLSLARQIDKILRKDSQEKANKSWLERNAEAIELVVENYDS
EDERVKSHKQKKTTSMQLKKLQQELNTMLSHPLQPKTFSRNYLAGAGVSPLLQHQLEEIA
KQKLPESSGSGENKRRKLVVIGQDCVEPLEALRSAGHEVRMDVKGVAEKRRNLENLRRRR
KEEKKRFRDQRRKQRKQLKGNAD
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaattcgccgccactctcttccgagtctacaacgaagaaaaaagcgaacaag
ataaaacgaactcaacaccaccaagaactggaaaaattcgactcgctcaaatggaacccc
tctctctcagccgacgaccccgaccctttctctttcctcgtcggctcctctgaacttgat
ggaggatttctttcgcttgaagagattgatgaagctgattatatgttacaaattcccaag
tccgagaagggaaagccagagaaaaaattgaagttgaagaaacagaagcaaaaagatact
gatgaggatttggatggtgtggttgaagatggaattggacacatagtggaggaagagaag
aatgagaagaagaagcagaagaagaagaagaaaaagaagggaaagaaagcgaagaaaact
gaggaatctgtgaatgtgagcaatggccagtataatgtagaagaagagttagttgatgaa
actgaagttccccctgaatatagtgcatggattgagttgagacttcatcctctgcttatg
aaatcaatatacaggcttggattcaaagaaccaacaccagttcagaaagcttgtattcct
gccgcatctcatcaaggcaaggatgtgataggtgctgctgaaacagggtctgggaaaaca
cttgcttttggtttgcccattattcaacgcctcttggaagaacgagaaaaagctgctaag
atgcttgaagagaagggagaggaagcagaaaaatatgctccaaaaggccttttaagggct
cttatcctcacccctacaagggagcttgcacttcaggtcactgatcatttgaaggaagta
gctaaaggtattaatgttagagttgttcctattgttggtgggatgtcaacagaaaagcaa
gaaagacttttgaaagcaaggcctgaagttatcgttggaactccagggaggttgtgggag
tttatgtcaggaggagaaccacatcttgttgagttacatactctgtctttctttgtgctg
gatgaggctgatcgaatgattgaaaatggacattttcgagagttgcagtcaataattgat
atgcttcctatgaccagtggctctgttgaaggacaagctcaacaaacacaaaattgcatg
acagtttccagcttgcagagaaagaaaagacaaacacttgttttttctgcaactatagca
ctatctgctgattttcgtaagaagctaaagcatggttcaataaaatcaaagcaatcatcg
attgatgggttaaactctatagaagctctttctgagcgagcaggaatgagacctaatgtt
gccattgtcgatttgacaaacgcatcgatattggctaataagcttgaggaatcatttatc
gaatgcaaggaagaagataaagatgcatacttgtattatattctgagtgttcatggacaa
ggacgcacaattgtcttttgtacatcaattgcagctttgcgtcatatttcttccatcttg
cggattcttggcgtcactgtttggacacttcatgctcaaatgcagcagcgagctcgcctg
aaggcaattgatcgtttccgtgcaaacgagcatggtatacttgttgctactgatgttgca
gcaagaggacttgatattcctggtgttcgaactgttgttcactatcaacttccacattca
gctgaagtctatgttcatagaagtggacgaactgctcgagcttctgctgatgggtgcagt
attgctataattacaccaaatgatacatcaaaatttgtctccttgtgcaagtcattttct
aaggaaagttttcagcgatttcctcttgagaactcatacatgaaagaggtcatgaaaaga
ttgtcccttgcacgtcaaatagataaaatcttgcgaaaggactcccaggaaaaggcaaat
aaaagctggcttgaacgaaatgctgaagccatagaattagtcgtggagaattatgacagt
gaggacgaaagagtgaaaagccataagcaaaagaaaacaacctctatgcagttaaaaaaa
ttgcaacaggaactcaatacgatgctttcacatccattgcagccaaagacattttcgcgt
aattatttggctggggctggtgtttcacctctcctgcaacatcagttggaagaaatagct
aaacagaagttgcctgagagcagcggttcaggagagaacaaaagacggaagttggtggtc
attggtcaagattgtgtggaaccgcttgaggcactccgaagtgctggtcatgaggtgcgg
atggatgtaaaaggagtggcagaaaagaggagaaatctggagaacttgaggagaagaaga
aaagaggagaagaaacgttttcgtgatcaacggagaaagcagaggaaacaactaaaagga
aatgctgactaa
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