Pistacia vera (pistachio): 116109836
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Entry
116109836 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA-decapping enzyme subunit 2-like
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116109836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116109836
Enzymes [BR:
pvy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
116109836
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116109836
mRNA degradation factors
5'-3' decay
Decapping complex
116109836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
116109836
NCBI-ProteinID:
XP_031251931
LinkDB
All DBs
Position
Unknown
AA seq
277 aa
AA seq
DB search
MSSLHRSSSAPYKSGGLPPQEPLDDLCSRFVLNVPKEDQQSFERILFLVEYAHWFYEDNS
VENNPSLKSFTLKEFTSLLFNSCDVLRPYVAHIDDIFKDFTSYKVRVPVTGAIILDETYE
QCILVKGWKGSSWSFPRGXKNKDEEDHTCAVREVLEETGFDVSMLLNKDVSIELIFGQQR
VRLYIIAGVRDNTFFAPQTKKGISEIAWHRLDDLQPATEDVISHGITGLKLYMVAPFLAS
LKKWISAHKPPIAPKLDMPLKGFPFSFSCEILILVEY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtctccatcgatcctcaagcgcgccgtataaaagcggcggccttcctcctcaa
gaacctctagacgatctctgcagtcggtttgtgttaaatgtgccaaaggaagatcaacaa
tcatttgagaggattttgtttcttgtggagtacgcacattggttctacgaggataattca
gtggaaaataatccatcactgaaatcattcactttgaaggagttcacttctttacttttt
aacagttgtgatgtattaagaccttatgttgctcacatagacgacatattcaaggatttc
acttcttacaaggttcgagttccagtaacgggggcaatcattttggatgaaacctatgaa
caatgcatactagtgaagggatggaaagggtcaagctggagttttccacgtggataaaaa
aacaaagatgaggaagatcatacatgtgctgtccgagaagtcctggaggaaacaggtttt
gatgtttcaatgcttcttaacaaagatgtgtccattgaactgatatttggacagcagagg
gtgcggctctacataattgctggtgtcagagataatactttctttgcccctcaaacgaaa
aaggggatcagtgaaattgcatggcatcggcttgatgatcttcagccagctactgaagat
gtgatatcccatgggatcactggtctgaagctttacatggtggctccttttttggcatct
ttgaaaaaatggatttcagcacataagcccccaattgctccaaaacttgatatgcctctc
aaaggtttccccttctccttttcctgtgaaattttgattttggtagaatattag
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