KEGG   Pistacia vera (pistachio): 116110802
Entry
116110802         CDS       T07386                                 
Name
(RefSeq) DNA repair protein RAD4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    116110802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvy03400]
    116110802
DNA repair and recombination proteins [BR:pvy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      116110802
SSDB
Motif
Pfam: BHD_3 Rad4 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 116110802
NCBI-ProteinID: XP_031252874
LinkDB
Position
Unknown
AA seq 952 aa
MRTRHNSKTQNASSGNENAMRAVTGSEGGSRVGSRKESGTLAETSREAVGKLLRRRANAR
GSKGSEKKDNPVGTAKSGTKVHENQVLDKRVTWNDVDAGGCSKDAIGNSSMEVDEERIER
LQDNLLDKSEEMDDSDWEDGSIPVNHSTENDPESHIKGVTIEFDAEDSARRKPVRRATAE
EKELAELVHKVHLLCVLARGRIIDGACDDPLIQASLLSLLPAYVFKVSEVSKLTARALSP
IVNWFHDNFHVRNSDSTGRSFPSALAYALENREGTAEEIAALSVALFRALKLTTRFVSIL
DVSSLKPEADKNESSSLDGGRSGGIFGSPTLMVSRPKEVALSLDKLISCDKKENVCEISS
RGLSKCKNSNPTSYNTQSKKSAIPDELNDRASDSLSCDAHCDTSEACHSKESQGLKRKGD
LEFETQLHMALSATAAGNCKSNLGSDEKNLNSDENVSSPFKRMKKIENIESSTSHEGIST
AVGSRKVGSPLYWAEVYCSGENFTGKWVHVDAANAIIDGEQKVEAAASACKIALRYVVAF
AGHGAKDVTRRYCMKWHKIASKRVNPGWWDAVLAPLRGLESGATGGTMHMEKNHGNSAGN
SGHNVESSVAARNSLEDMELETRALTEPLPTNQQAYRNHQLYAIERWLNKYQIIHPKGPV
LGFCSGHPVYPRTCVQTLKTKERWLREALQVKANELPVKVIKNSTKLKKGQVYEAEDHDE
VDSKGNIELYGKWQLEPLRLPHAVNGIVPKNERGQVDVWSEKCLPPGTVHLGLPRIFSVA
KRLEIDYAPAMVGFEFRNGRSTPVFDGIVVCSEFKDIILEGYAEEEEKRVAAEKKRKEAQ
AISRWFQLLSSIVTRQRLNNCYGDGSSSQTSSAIQNIKNNESNLRVGDSQDDKQSQECRK
VDTRDAKLDAALVVVTAEHEHDYLIEDQSFDEENSVRTKRCHCGFTIQVEEF
NT seq 2859 nt   +upstreamnt  +downstreamnt
atgcgaaccagacacaattccaagacacaaaacgcctcttcaggtaatgagaatgcaatg
agagcagtgacaggttcagaaggcgggagtcgtgtagggtcacggaaagagagtggaacc
cttgctgagacatcaagggaagcagtagggaaacttcttcgacgacgtgctaatgctcgg
ggctcgaaggggtctgagaaaaaagataaccctgttggcacggcgaagagtggaactaaa
gttcatgaaaatcaagttttagataaaagagttacatggaatgatgtggatgccggaggg
tgcagtaaagatgcaataggcaactcgtcaatggaagttgatgaggagagaattgaaaga
cttcaggacaatcttttggacaaaagcgaagaaatggacgactcagattgggaagatggt
tcaattcctgtaaaccattccacggaaaatgatccggaaagtcacattaagggggtcact
attgaatttgatgcagaggattctgctagacggaagcctgttcgtcgagctactgctgaa
gagaaggaattggctgagcttgtgcataaggtccatctactctgcgtacttgcaaggggc
aggataattgatggtgcttgtgatgatcctcttattcaggcttctctactttctcttctg
ccagcatatgtgttcaaagtatcggaggtctcaaaacttacagctagagctttatctccg
attgtcaattggtttcatgacaactttcatgttagaaactcagatagcacagggagatca
tttccttcagctttggcctatgctcttgaaaatcgtgaaggcactgcagaggagattgcg
gcattgtctgtggcattatttagagctttgaagcttacaacccggtttgtgtctattctg
gacgtttcctccttaaaacctgaggctgataaaaatgaatcttcaagtctagatggtggc
agaagtgggggaatattcggttctccaactctgatggtaagccgaccaaaagaagttgct
ttgtctttggataaattaatttcctgcgacaaaaaagagaatgtatgtgaaatttcttca
aggggtttatccaaatgtaagaatagcaacccaacaagctacaatactcaatccaaaaag
tctgccatacctgatgagttgaatgatagagcttcggattcattgtcgtgtgatgcacac
tgtgatacctctgaagcatgccatagcaaggaatctcagggtttgaagaggaagggggat
cttgagtttgagacgcagttgcacatggctctttctgcaacagccgcggggaattgtaaa
agtaacttagggtctgatgagaagaacctgaatagtgatgaaaatgtctcttctccattc
aaaagaatgaaaaagattgaaaatatagaatcctcaacttctcatgagggaatatccact
gcagttggatcgagaaaagtaggatctcctctgtattgggcagaagtatactgtagtggt
gagaattttacaggaaaatgggtacatgttgatgctgccaatgcgatcattgatggagag
cagaaggtagaagctgcagcttctgcatgcaaaatagctttgagatatgtagttgctttc
gctgggcatggagcgaaagacgtgacccgcagatactgtatgaagtggcacaagatagca
tcaaaacgagttaatcctggctggtgggatgcagttttggcaccgttgagagggttagag
tctggagcaactggaggtacgatgcatatggaaaaaaatcatgggaactcggctggaaat
tctggccataatgtagaatcttctgttgctgccaggaactcacttgaggatatggaattg
gaaactagggcactaactgagcctcttcccactaatcagcaggcctacagaaaccatcaa
ttatatgctattgaaagatggcttaataagtatcagataattcatccaaagggccccgtt
cttggattctgctctggtcatccagtttatcctaggacttgtgtgcaaacactcaagaca
aaagaaagatggctgcgggaagcactacaggttaaagccaatgagcttcctgtgaaggtg
ataaagaattctacaaaacttaagaaaggacaggtttatgaagctgaggatcatgatgaa
gttgattctaaaggaaatattgaactttatgggaagtggcaactggaaccgttgcgtcta
cctcatgctgtcaatggcattgttccaaagaatgagcgtggtcaagtcgacgtgtggtct
gagaagtgccttccaccagggacggtacacttagggttgcctaggattttctctgtggcc
aagaggctggaaattgattatgcacctgccatggttggttttgaattccgaaatggtcgt
tctactcctgtctttgatggtattgtggtctgctctgagttcaaggatataatattagag
ggatatgcagaagaagaggagaaaagagtagccgcagagaagaaaaggaaggaagcacaa
gctatttctaggtggtttcaacttttatcttccattgtaactcgacaaaggttaaacaac
tgctatggggatggttcatcttcacaaacatccagtgccatacaaaacataaagaataat
gagtcaaatcttcgggttggtgatagtcaggatgataagcaatctcaggagtgccgtaaa
gtagatacacgggacgccaaactagatgctgctttggtggtagtaacagcagagcatgag
catgattatttgatagaggatcagagttttgatgaagagaactctgtgcggacgaagcgt
tgtcattgtggctttacaatccaagttgaggagttttag

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