Pistacia vera (pistachio): 116110890
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Entry
116110890 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116110890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvy04121
]
116110890
Enzymes [BR:
pvy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116110890
Ubiquitin system [BR:
pvy04121
]
Ubiquitin ligases (E3)
HECT type E3
116110890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
116110890
NCBI-ProteinID:
XP_031252962
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MFFSGDPTTRKRVDLGGRSSKERDRQKLLEQTRLERNRRLYLRKQNQAAIKIQKCFRGRK
AMEIEHFKVREQFYATYGRHLQYVNRNCFGPDSGFLXSLSFLYARNADDIAILVETCRLL
QRFVQDSGNDIVALCGMITHPSMLXXTTVKKFAFACIQSLHQNRNQLKDKLLVTPEDSGV
STTLLLESVVLLIDPKLPWVCKIVGYLLQRNAFTLLRDLVLMMKESTKTCTSGGKISSVE
RVLTLIIPHIGRSPCICPNIDPRWSFSSQILTIPFLWHLFPYLKEVFATGGMSQHYVHQM
ALCVQNHANVLPNDKSIELPGYACLLGNVFETAGVALSQPDCSFEMAIDLAAVTTFLMEA
LPPIKSLGKESSSVSEDDMITGDEVMEIVLNRDLEQQITNAIDSRFLLQLTNVLFKGIPL
VCGSHNEGPDDKEVAAVGAACAFLHVTFNTLPLECIMTVLAYRTELVPLLWNYMKRCHQI
KKWPALAYPSGDAPGWLLPLAVFCPVYKHMLMIVDNEEFYEQEKPLSLKDIRYLVVILRE
ALWQLLWVNPTSHANVGKSVSNPSSHKKLPFEVIQNRVSIVASEVLSQLQDWNNRRQFTT
PSDFHADGVNDFFISQAVTEGSRASDILKQAPFLIPFTSRVKIFHSQLAAVRQRHGSHGV
FTRNRFRIRRDHILEDAYSQMSALSEEDLQGAVRVTFVNELGVEEAGIDGGGIFKDFMEN
ITRAAFDVQYGLFKETADHLLYPNPGSGMIHEQHLQFFHFLGTLLGKAMFEGILVDIPFA
TFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHFEGDISELELYFVIVNNEYGEQTEEEL
LPGGKNIRVTNENVITFIHLVSNHRLNFQIRQQSSHFLRGFQQLIQKDWIDMFNEHELQL
LVSGSHDSLDFDDLRQHTNYAGGYHAEHYVIEMFWQVLKSFSFENQKKFLKFVTGCSRGP
LLGFRYLEPLFCIQRAAGDASEEALDRLPTSATCMNLLKLPPYRSKEQMVTKLLYAINAE
AGFDLS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctccggcgatccaacgactcggaagcgagtcgatttaggaggtaggagttcc
aaggagagggataggcagaagcttcttgaacagacgaggttagagcgtaatcgtcgacta
tatttgcggaagcagaaccaggcggcgatcaaaattcagaaatgcttcagagggaggaaa
gcaatggaaattgaacatttcaaggtgcgagagcagttttatgcaacctatgggcgtcat
ctccagtatgtgaacaggaattgttttggtccagattcagggttcctcnngtcgctttct
tttctttatgcacgaaatgctgatgatattgctatccttgtggaaacgtgtcggttactt
cagcgttttgttcaagatagtggtaatgacattgtggctctttgcggcatgattactcat
ccaagcatgctttagtagactacagttaagaaattcgcgtttgcctgtattcagtcgcta
catcagaatagaaatcaattaaaggataaacttttagtgactcctgaagactcgggtgtg
tcaacgactctattgcttgaatcagtagttttgttgattgatcctaaacttccatgggtt
tgtaagatagttggttatctcttgcaaaggaatgcgtttactctgcttagggatcttgtt
cttatgatgaaggaaagtacaaagacttgcacatccggtggtaaaatttcttcagtggag
cgcgtgctgacccttataattcctcacattggtcgaagcccatgtatttgcccaaatatt
gacccacgatggagtttctcttcgcagattctcacgataccattcttatggcatcttttc
ccatacctaaaggaggtttttgcgactggtggaatgagtcaacattatgtacatcagatg
gcattgtgtgtgcaaaatcatgctaatgtacttccgaatgataagtcgattgagttacct
ggttatgcatgtcttcttggtaacgtattcgaaactgcaggagtcgctttatctcagcct
gactgttcatttgaaatggcaattgaccttgctgctgttacaacattcttgatggaggca
cttcctcctataaaatcattgggaaaagagagttcctcagtcagtgaggatgatatgatt
actggtgatgaagtgatggaaatagttttgaatagggatttggagcagcagataaccaat
gccatagattcacgttttcttttgcaattgacaaatgttttattcaaagggataccattg
gtatgtggttcacataatgaaggaccagatgataaagaggtggcagctgttggcgctgct
tgtgcatttttacatgtcaccttcaacactttacctttggagtgcattatgactgtcctg
gcttatagaactgaacttgttccattactttggaattatatgaagcggtgtcatcagata
aaaaagtggccagccttggcgtatccctcaggagatgcacctggttggctactacctctg
gctgtattctgtcctgtgtacaagcacatgcttatgatagttgataatgaggagttctat
gagcaggagaagccattgtcattgaaggatatcagatatctagttgtcatcttgagagag
gccttatggcagctcttatgggtgaatcctacatcacacgctaatgtaggaaaatctgtc
tccaatccctcttctcataaaaagctaccatttgaagtcattcaaaacagggttagcatt
gtagcctctgaggtcctttcacagttgcaagattggaacaatagacggcagtttacaacc
ccaagtgactttcatgctgatggtgtcaatgactttttcatttctcaggctgtaacagaa
ggttccagagcgtctgacatactgaagcaagctcctttcttgattccatttacaagcagg
gtcaaaatatttcattcccagttagcagctgttaggcaaaggcatggctctcacggcgtt
ttcactagaaatcggttcagaatccgcagggatcatattctggaagatgcttatagtcag
atgagtgcattgtctgaagaggatctccaaggagcagttcgtgtaacatttgtcaacgaa
cttggagttgaggaggctggtattgatggtggtggaattttcaaagactttatggaaaat
ataactcgtgcagcttttgatgtgcagtatgggttatttaaggaaacagctgatcaccta
ctctaccctaatcctggatcaggaatgatacatgagcagcacctccagtttttccatttt
cttggaactcttcttgggaaggccatgtttgaagggatacttgttgatataccatttgca
actttcttcttgagcaagttaaaacaaaagtacaactatttgaatgacttgccgtcattg
gacccagaattatatcgtcaccttattttcttgaagcattttgaaggtgacatttcagag
ttagaactctactttgttattgtaaataatgaatatggagagcaaacagaagaagagctg
cttccaggagggaaaaatattcgtgttactaatgagaacgtaattacgttcattcatctt
gtgtccaatcaccgcttgaattttcagatacgtcaacagagttctcatttcctgaggggt
ttccagcagcttatacagaaagattggattgatatgtttaatgagcatgaacttcagctt
ctagtatcaggttcacatgacagcttggattttgatgacctaagacaacacaccaattat
gctggtggctatcatgctgaacactatgtcattgagatgttctggcaagttctcaaaagc
ttttcattcgaaaatcagaagaaatttttgaagtttgtgactggctgttctcgaggaccg
cttctgggattcagatatcttgaacctttattttgtatacaaagagctgcaggtgatgct
tctgaagaagctcttgaccgcctaccaacatcagctacatgtatgaatcttctaaagctt
cccccatacaggagcaaagagcaaatggtgacaaaactgctatatgccataaatgcagaa
gccggttttgatttgagctga
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integrated database retrieval system
