Pistacia vera (pistachio): 116111053
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Entry
116111053 CDS
T07386
Name
(RefSeq) chaperonin 60 subunit beta 3, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116111053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116111053
03110 Chaperones and folding catalysts [BR:
pvy03110
]
116111053
03029 Mitochondrial biogenesis [BR:
pvy03029
]
116111053
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvy04147
]
116111053
Enzymes [BR:
pvy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116111053
Messenger RNA biogenesis [BR:
pvy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116111053
Chaperones and folding catalysts [BR:
pvy03110
]
Heat shock proteins
HSP60 / Chaperonin
116111053
Mitochondrial biogenesis [BR:
pvy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116111053
Exosome [BR:
pvy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116111053
Exosomal proteins of other body fluids (saliva and urine)
116111053
Exosomal proteins of breast cancer cells
116111053
Exosomal proteins of colorectal cancer cells
116111053
Exosomal proteins of bladder cancer cells
116111053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
116111053
NCBI-ProteinID:
XP_031253121
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MASTFAAMSPIGSMVAPNGRVTDKKLASSSNKLSSFASISSSSFGRRQSVALRRAHSPKI
YAAKDLHFNKDGVAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITR
GIEKTTKALVSELKSMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMSKVGRKGVVTLEE
GKSAENTLYVVEGMQFDRGYISPYFVTDSEKMAVEFENCKLLLVDKKITNARDLINILED
AIRSGHPIVIIAEDIEQEALATLVVNKLRGALKIAALKAPGFGERKSQYLDDIAILTGGT
VIRDEVGLALDKVGKEVLGNASKVVLTKDSTTIVGDGSTQDAVNKRVAQIKTLIENAEQD
YEREKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTL
LRLSSKVDAIKESLGNDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDNHKY
GYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAVPAGNP
MDNSGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactttcgctgccatgtctccaattggctctatggttgctcctaatggccgc
gtgactgataagaaacttgcatcttcttccaataagttgtcatcattcgcatccatttct
tcgagctctttcggtagaagacagagtgttgctctacgtagggcacactctcctaagatt
tatgctgcaaaggatttacatttcaacaaggatggagtggccattaagaaactacaaact
ggtgtgaacaagcttgcagatcttgttggggttacccttggtcccaaaggcaggaatgtt
gttctagagagcaagtatggtgctccaaaaattgtcaatgatggtgtgactgtggccaaa
gaggttgagttggaggaccctgttgagaacattggtgctaagttggtgagacaggcggct
gccaagaccaatgacttggctggagatgggaccaccacatctgttgttcttgcacaaggt
cttattgctgaaggtgtcaaggtggtggcagctggagctaaccctgttttaatcacaaga
ggcattgagaagacaaccaaggctttagtttcggagctcaagtcaatgtcaaaagaggtt
gaagacagtgaacttgcagatgtagcagcagttagcgctggtaacaactacgaagtaggt
aatatgatagctgaagccatgagtaaagtgggtcggaagggtgttgtgactcttgaagag
ggtaaaagtgctgagaacaccctctatgttgttgagggaatgcaatttgatcgtggttat
atctctccttattttgtcactgatagtgagaaaatggcagttgaatttgagaactgcaag
ttgcttcttgttgataagaaaataacaaatgcaagggatcttatcaacattttggaagat
gcaattaggagtggacacccaattgtgataattgcagaagacattgagcaagaagcttta
gcaacacttgttgtgaacaagctgagaggggcattgaagattgctgctctcaaggctcct
ggatttggtgagcgcaagagccagtacctcgatgatattgctattctgaccggaggaact
gtaatcagggatgaggtcggacttgccttggacaaagttggcaaggaagtgctgggtaat
gcttctaaagtggtgcttacaaaggacagtaccaccattgtgggtgatgggagcacccaa
gatgcagtaaacaaacgagttgcacaaattaaaactcttattgagaatgctgagcaagac
tatgaaagggagaaacttaatgaaagaattgcaaaactatctggtggtgttgctgttatt
caggttggcgcacaaactgaaactgagctcaaagaaaagaaactgagagttgaagatgca
cttaatgcaacaaaggcagctgttgaggaaggtattgtagttggtggtggatgcacactt
ttgagactatcatcaaaagtagatgccattaaggagagcctgggtaatgacgaagaaaag
gttggggccgaaattgtgaagagagctctgagttaccctctgaaattaattgccaaaaat
gccggtgttaatgggagtgtagtcagtgagaaggtgctctctagtgacaaccacaaatat
ggatacaatgctgcaactggaaactatgaagatttgatggctgcaggaattattgatcca
accaaggtggtcaggtgttgcctggagcatgcttcctcagttgccaaaactttcttgatg
tccgactgtgtggtggttgagatcaaggagcctgaatccgccgttcctgctgggaaccca
atggacaattcaggtttgtag
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