KEGG   Pistacia vera (pistachio): 116111116
Entry
116111116         CDS       T07386                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pvy  Pistacia vera (pistachio)
Pathway
pvy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116111116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvy03041]
    116111116
Spliceosome [BR:pvy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    116111116
 Complex B
    116111116
SSDB
Motif
Pfam: zf-CCCH RRM_1 RRM_MUD2_C zf_CCCH_4 Torus zf-CCCH_DUS3L RRM_ACIN1 zf-CCCH_4
Other DBs
NCBI-GeneID: 116111116
NCBI-ProteinID: XP_031253176
LinkDB
Position
Unknown
AA seq 314 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
GVDPQGQALDPRKIQDHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE
HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRDL
RRRLFGRNRRRRSRSRSRSRSPHKHRGYEERAHGGRGSGRRDDERDHRYHDRGRRPRSRS
PGRKGGRSRSPGLRRNRSPVRESSAERRAKIEQWNREKEEAESGHKIDNSNDDDDRNNNG
FATDDGQYSDPQQQ
NT seq 945 nt   +upstreamnt  +downstreamnt
atggcggagcacttagcatctatcttcggaacagagaaggatagagttaactgtccgttc
tatttcaagatcggagcttgccgtcatggagatcggtgctccaggcttcacactaaacct
agtattagccccactctccttctctccaacatgtaccaacgccctgacatgatcactccc
ggcgttgacccccaaggccaagctcttgacccccgcaagatccaagaccacttcgaggat
ttttatgaggatttatttgaggagcttagcaagtacggcgagatcgagagcttgaacatt
tgtgacaatttggcggaccacatggtgggtaatgtgtatgttcagttcagagaggaagag
catgctgccaacgcgcttcgaaatctcaatggaaggttttatgcagggcgtcccatcatt
gttgatttctccccagtgactgattttcgagaagccacttgtaggcagtatgaggaaaac
gtatgcaatcgaggtggctactgtaacttcatgcatttgaagaagattagcagggacttg
aggaggcgactgtttgggagaaataggagaaggcgcagccgcagtcgaagcaggagtcgt
agtccacataaacatcgtggttatgaggagcgcgcacatggaggccgtggttcaggtaga
cgtgatgatgaaagagatcatcgctaccatgataggggcaggaggcctagaagccgaagt
cctggacgtaaggggggacgaagcagaagcccagggttgaggaggaataggagtccagtt
agagaaagtagtgctgaaagaagggctaagattgagcaatggaacagggaaaaggaggag
gcagaatctggtcataagattgataatagtaacgacgacgatgacaggaacaacaacggc
tttgcaactgatgatggtcaatatagtgatcctcagcagcagtga

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